K25305

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25305

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25305

Determination of introduced cDNA(s)

J013039L12 - Rice Full-length cDNAs - Original: J013039L12

full reading [+] show sequence

TGGGCGAAGT CAATCCGGCG ATCCCCGGCG AGCGAGAGAT CGAAGCAAGC 
TGCTACACAG ATCTCACGAC GTGGCCGAGG CGGCGTCGGC GGCGGCGGCG 
GCGACGACGG AGCAGGCGAA TGGGAGCAGC GGCGGCGAGC AGAAGACGCG 
GCACTCGGAG GTCGGCCACA AGAGCCTCCT CAAGAGCGAC GATCTCTACC 
AGTACATCCT GGAGACGAGC GTGTACCCGC GCGAGCACGA GTGCATGAAG 
GAGCTCCGCG AGGTCACCGC CAACCACCCA TGGAACCTGA TGACGACGTC 
GGCGGACGAG GGGCAATTCC TGAACCTGCT GCTGAAGCTC ATCGGCGCCA 
AGAAGACCAT GGAGATCGGC GTCTACACCG GCTACTCCCT CCTCGCCACC 
GCCCTCGCCA TCCCCGACGA CGGCACGATC TTGGCGATGG ACATCAACCG 
GGAGAACTAC GAGCTGGGGC TCCCGTCGAT CGAGAAGGCG GGAGTGGCGC 
ACAAGATCGA CTTCCGGGAG GGACCCGCGC TGCCGGTGCT GGACCAGCTG 
GTGGAGGAGG AGGGCAACCA TGGGTCGTTC GACTTCGTGT TCGTCGACGC 
CGACAAGGAC AACTACCTCA ACTACCACGA GCGGCTGATG AAGCTGGTCA 
AGGTCGGCGG CCTCGTCGGC TACGACAACA CGCTCTGGAA CGGCTCCGTC 
GTGCTCCCCG CCGACGCCCC CATGCGCAAG TACATCCGCT ACTACCGCGA 
CTTCGTGCTC GAGCTCAACA AGGCCCTCGC CGCCGACCAC CGCGTCGAGA 
TCTGCCAGCT CCCCGTCGGC GACGGCATCA CCCTCTGCCG CCGCGTCAAG 
TGAGCCCGCC GCCGCCGCGA GTGCGACTCC GGCCGATGCC CAAGAACTAG 
TCATTTTAAA TTTATAAATT ATAACTAAAT TGTATAATTT TTGCCTTTTT 
TTTTTAATTT GCAAGCTACT GGAAAATGTT ATTTAATATA TGTATAAATG 
TCGAGACAAT AATATTATTG CATTATAAAT TGACCTGGTT TTTGTTAGCT 
TT

Gene models with high sequence identity

AT4G34050.1 [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
E-value: 1e-115; Score: 413.00

InterPro Scan Digest

Program	Description	E-value
superfamily	S-adenosyl-L-methionine-dependent methyltrans	7.1e-42
HMMPfam	O-methyltransferase, family 3	1.7e-88
Gene3D	no description	1.8e-53
HMMPanther	O-methyltransferase, family 3	5.2e-91

See the detailed result >

AT4G34050.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1); FUNCTIONS IN: caffeoyl-CoA O-methyltransferase activity; INVOLVED IN: coumarin biosynthetic process, response to cadmium ion; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G26220.1); Has 5458 Blast hits to 5455 proteins in 1478 species: Archae - 33; Bacteria - 3172; Metazoa - 243; Fungi - 122; Plants - 614; Viruses - 0; Other Eukaryotes - 1274 (source: NCBI BLink).
Link: InterPro Scan - TAIR