K25408

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25408

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25408

Determination of introduced cDNA(s)

  • J013161L12 - Rice Full-length cDNAs - Original: J013161L12

    full reading [+] show sequence

    Nucleotide sequence: J013161L12 - full reading 
    GTCAGGAGGG TTTTCCCTTT TCCACCTTGT CGCCGGCAAA GCCACAGCCA 
    CGGCGATCTG CTCCCCCTCA CGGCGGCGAT GGCGCTCTCG ACCTCCCGGC 
    CTCACCACCT CCTGCGCCCT CTCCTCCGCG GCTTCCACGC CACTTCTCAG 
    GCCATGGCGA GGCCTGAGCC CCACGAGTTC TCCAAGCCGA GCGACTACCT 
    CGGGAGCTGG GAGCCCGCGG GCGACCCACG GGAGGCGTGG GCGCGGCTGG 
    AGCGGCTTCG CAAGGGCTAC GCGCGCGACG TGCGGCAGCT GCGGAGGCAG 
    TACTCGTACG AGATGCAGCT GCTGGAGGCC GAGCGGCAGC GCAAGGCGGA 
    GGCCCGCGCC GAGGCCGCCC GCCTCGCCAA CGAGGAGCGC AAGGCCACCA 
    AGGCCGCCGC CGCGCAGACG CGCGCCGCCG AGCGCCGCGC CTTCGAGAAG 
    GACTTCCGCC AAGCCCTTAT GAAAGAAAGA GCTGAGAAGC TGGAGAGCTG 
    GAGGGAGAAG GAGAAGCTTA AAGTACAGAA GAAGGCGGAT CACAGGGAGC 
    TCTTGCGCAA GAAAAGCTCT ATGTGGGTTG CTGAGGATAA ACTGGAAACA 
    ACAATTCTTG ACGCTATCAA AAATACCACA GCTCTCTGAG GATACAAGAT 
    GGTGTATTCT GAAAGCATGA CGGAGGATGG ACTGAAGGAA GCTTATTTGT 
    GATTCCCTTC TGGAACTAAT CACAACTGCC TAAGCAATAA CAACCATATT 
    TGAAAATTCT GCTGCAACAC TGTATGTTAT ATTGTTAGAC TTGAACGCCA 
    AGCTGAAATT GTATTTTGGC ATTGCCTTTT TTCTGAGAGA GACCTCTCTC 
    CTCAAATTTC TGTTAAAAAT TTGTTGCACG ATTAAAATTA TCATGGCCAA 
    ATTTTGATTT TCCTGCATGA TCTAGTTGCA AACTGTGTTT TACGTTTGGG 
    TACATTTGTC TACATTTTTT GAATGGAATA TTGGAGTTCA TCGTTG

    Gene models with high sequence identity

    1. AT5G49210.2 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 3e-18; Score: 89.70

     

    InterPro Scan Digest

    See the detailed result >

    AT5G49210.2

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR