K25419

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25419

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25419

Determination of introduced cDNA(s)

  • J013158B15 - Rice Full-length cDNAs - Original: J013158B15

    full reading [+] show sequence

    Nucleotide sequence: J013158B15 - full reading 
    GACTGGCGTG CAGGGCCGCT GCTGCTGCTG CTTGCTCTTG CTCTTGCTGC 
    TGGGTGGAGT GAGCGAGAGA TCCCATGTGG CATTGGAGCG CTGTCTCCTG 
    CTGCTGCACA GTCTACTCTC ACCTGCTCCG CCTCTCCCCT CGTTAATTCT 
    TGGCGGCTGT GTGGCGAGGA AGAAGAAGCG GTGATGGCAT GCTGATGGGC 
    TGCGGGTTCT TGGATGCATT TGGGTGGATA TGCGGACATG GTGGAAGCTG 
    TAATTTGAGA GCGATGGGAG CATCTTCTTA GGGATCCTCT TCCACTGGCT 
    AGCCTACAGC TGTTTTTCTC CTTCATTGGT ACTCCAATCT TGGCTGGAAT 
    TTTGAATCTT TTGTCCGGGA AGTGATAAAA TTTAGAAAGA CAACACAACC 
    ATTGGCACTT CTTACAGTTG TGAGCGCTAA GCTGAGCCTC CAATGGCGTG 
    GCATTTTACT GCGGCTTTCA TGATCGCAAC CTGTTTGATG TTATTCCCAA 
    GAAGCGAGCA GTCCTCGCAG GGTGAGGTGC TGCAGCAGCT AAGGAAGCAG 
    CTGGAGTACC CAAGGCAGCT GGATGTATGG AATAACCCAA ACAGTGACCC 
    CTGCTACACC CAGCCTACTT CGGTGGTCAC CGTGGCATGC GAGGGGAACG 
    CCATTACAGA GCTTAAGATT ATCGGTGACA GGATCACCAA GCCACCAAAG 
    TTCAGTGGCT ATCCTGTCTC CAATATCACC CTCTCTGAAG CCTTTGTTCT 
    CGATTCGTTT GTTACTACAT TGGCAAGGTT ACCTGCCTTG CACGTTGTTA 
    TCCTAGTATC CTTGGGGCTA TGGGGTCCTC TTCCTGACAA GATTCACCGG 
    CTGTCATCTC TTCAAGTGCT TGATTTGAGC TCCAATTTCC TTTATGGATC 
    GATTCCTCCG AAGCTGTCAG CCATGCCAAA GTTGCACACC TTGACATTGG 
    ATGGGAACTT CTTCAATGGT ACCATGCCGG ACTGGTTCAA CTTGTACTCG 
    AACCTCACGG TTCTTCGCTT GCAGCGTAAC CGGTTGAAGG GGCCCATACC 
    AGCATCAATT GGTAAAGCTA CCATGCTTAG TGAGCTTGCT CTTGCTGGCA 
    ACAGCATCGC TGGCGAGGTT CCACAATTAG GCAGCTTGAA TAAGCTTGAG 
    ATGCTGGACT TGAGGGACAA TGAGTTGGAT GGGGAGCTCC CAGAGCTGCC 
    TACAGCATTG GTAACAATCC TACTTAGCAA AAACTCACTC AAGGGCGAAA 
    TCCCTGAGCA GTTTGGTCAG TTGAACCGAC TTCAGCACCT CGATCTCTCA 
    TTCAACTTTC TCGTGGGGAA GCCTCCTGAA AAGCTCTTCG CTCTTCCAAG 
    CATCAGCTAT CTCAACCTAG CTGCGAATAT GCTCAGTGGA TCATTTTCTA 
    CTAGTTTAAC ATGCAGCAGT ACCCTTGGCT TTGTGGATTT GTCTACAAAC 
    CAACTCACAG GTGACCTGCC TGTCTGTCTT AATGTTAATG TCAATAACAG 
    GGTAGTTAAG TTTGATGGTA ATTGCTTCAG TGACGACCCT GAACACCAGC 
    ATGAAACTAA GTATTGTCAA CAACCTCACA AGGGGAGAGG ATCAAACAAG 
    GATGTTGGAC TTGTGGTCAC TGTTGTTGGG GTGGTGTTTA TTGTGCTTGT 
    GCTTTCTCTT ATATTAATGG CTTCAAACAG AAGAAGCTGT CAGAGAGTTT 
    TAGCAGAACA ACAGTTACTT CAAAAGCAAA TGCAAGATAA TTCGACATCA 
    GGAATGTCAA CTGAACTGCT AGTAAATGCA AGGTACATAT CTCAAGCTGT 
    AAAATTAGGG ACACAAATAA TGCCCATGTA TCGAGCATTT TCTTTGGAAG 
    AGCTCAAGGA AGCAACAAAA AGCTTTGAGA GGTCGGCATT TTTAGGCGAG 
    GGGTCAATTG GAAAGCTGTA CAAGGGAAAA CTAGAGAATG GAACCCTGAT 
    TGCCATAAGA TGTTTGGCAT TGCACCAACG ATACTCAATA AGGAATCTAA 
    AACTTCGATT AGATCTACTG GCGAAGCTTC GTCACCCAAA TTTGGTTTGC 
    CTCTTGGGGC ACTGTATTGA TGGCGAAGTT GATGAATCAA GTGTGAAAAG 
    GGTTTTCCTT GTCTATGAAT ATGTACCTAG TGGAACGTTT CCTTCATATC 
    TTTCTGGTAA GGAACTAAAA ATAAAATGAG GAATTAAAGT CGTG

    Gene models with high sequence identity

    1. AT5G14210.1 [+] show detail - Leucine-rich repeat protein kinase family protein
      E-value: 1e-131; Score: 468.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 13.277
    Gene3D no description 6e-43
    Gene3D no description 0.000000000000089
    superfamily L domain-like 8.8e-54
    superfamily Protein kinase-like domain 6.4e-19
    HMMPfam Leucine-rich repeat 0.14
    HMMPfam Leucine-rich repeat 0.76
    HMMPfam Serine-threonine/tyrosine-protein kinase 0.00000005
    HMMPanther LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KIN 3.9e-134
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.9e-134

    See the detailed result >

    AT5G14210.1

    Model type
    Protein coding
    Short Description
    Leucine-rich repeat protein kinase family protein
    Computational Description
    Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR