K25603

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25603

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25603

Determination of introduced cDNA(s)

  • J033118F12 - Rice Full-length cDNAs - Original: J033118F12

    full reading [+] show sequence

    Nucleotide sequence: J033118F12 - full reading 
    GAATAGCTAA ATATATATCT TCCTCGACTC CGACAAGAAT AGGGTTCCAC 
    CGCCGCCGCC GCCGCTCGCC GGAGAGAGAG AGATGAAGAG CTTCCCGGTT 
    GCCGGAGGCC GCAGCGTCTC CCTCGGCCTC TTCTCCGACG TCTCCAACAG 
    CTGGGAGCTC CTCGAGCTGA TGCAGTCAGG GAAGCTGGAG CCGGAGGTCG 
    CATTCCTCAA CGCATCACTG GTGCCGGATG TGTTCCCGGT TCTCGCGGCG 
    GCGCACAAGG CGGTGGTGTC GCAGGGGAGG GAGTCTCTGA CCACAAGAAC 
    TCTGCATTCG GAGCTCGTCT ATAACTACTC CGGGTCTAAG CATATAACGG 
    AGTCTTTGAA ACGATGCGGA ATCTCCGACG ACACGAGTTA TATCCTTGCA 
    GCTCGTTTTG ATGCTTCGAA TGAGGAGATA AAAGCTGTGG AGAAGCTCAT 
    CTGTGGCACT GAGATTGATC TAGCGGAACT GGAAACAAGA GCAAACCAGC 
    CACAGATCCT GAAGCATTAT AAAATAACTC CCCAGGAACT ATCAATATCT 
    ACACTGCCCG ATGCAATTGT ATGCAGGATT GCTGCTCGAG ATGCCCTTTG 
    AGTGACATCA CGGATCAAGA TTGAAATCTG GGAGGCCTGG TGGTTTTTTG 
    CACATGATGA TGTGGTACCG GTATGTTTGT TACTGTATGA TGATGGTTGC 
    TAGTACTACT GGACTACTGG TGCTTTGGGT TCACGTGCTG CTGGGACAGC 
    GTTGCAGCTG TCGTTTCTGT CCAAGAGAAA AACATGGACA GAGGAGCTGG 
    TAACCTGCCC GCCATTGCAG CTGTTACTGC AAATTCCAGT TCAATGTTTT 
    CTTTTGCATG ATCCATCAAT CTATCATGCA TGTAATTTGA AATTCAAGAA 
    CCCCACTGGT TTTGTTTTTT GTTTTTTTGG CCAAAACACT CTGCTGTGTT 
    CTGTTTGTTT TTGGAGTCTG TATGATGGTA TCTGTCAGTA TCATTATCTT 
    GCTCATCAGT TCGTCTATCA ATTGGG

    Gene models with high sequence identity

    1. AT4G34412.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hi...
      E-value: 2e-60; Score: 229.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Kinase binding protein CGI-121 2.7e-36
    HMMPanther gb def: At4g34412 3e-93
    HMMPanther CGI-121 FAMILY MEMBER 3e-93

    See the detailed result >

    AT4G34412.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR