K25815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25815

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K25815

Determination of introduced cDNA(s)

  • J023114K11 - Rice Full-length cDNAs - Original: J023114K11

    full reading [+] show sequence

    Nucleotide sequence: J023114K11 - full reading 
    GGGTGGTAGT AGCATTGCCT ACTTTCACAT ACGCGCGGCG CCGCTGGTGC 
    TGGCTGGCTG GCGCGCGCAC CGGCGGGCGG AGAGCGAGGT TTTTCGCCGG 
    TGTTTTGGTT GGCCTCCGCC GTTCCGCGCG GTGGTGGTGG TGGTGGTTGC 
    TGTGGTAGCG AGGGTACGCT TTGGAGACGG AGATGGAGAT CGGCGCCGTT 
    GAGAACGGGG GTGTCGTCGG TGGTGAAGTT GTGGCAGGCA AGAGGGGGAA 
    GACGCCGCAA GGTTGGAAGT GCATGCCATT CATCATAGCA ACTGAGACAT 
    TTGAAAAGGT TGCGACAATT GGAGTGGTAG CAAATTTGAC GGTCTATCTT 
    GTGAAGCGCT TCAACATTGG GCAAATTGAG GCAGCTAATA TTACCAACAT 
    ATTCTTCGGT ACGCTTAACT TTGCGCCATT GCTAGGCGCC TTCATCTCCG 
    ACGTCTACTT GGGAAGGTTC AAAACACTAG CCTATGGATG CTTCGCCAGC 
    CTCCTGGGGA TGCTGGGAAT GACTTTGTAT GCATCACTTC CAGCTCTCAA 
    GCCACCGATC TGCCATGAAA AAACCCGACT AGGCGGAGGC TGCAACAGTC 
    CATCAACACT CCAGCTAAGT GTGCTATACC TTTCTCTAGG CTTTCTAATT 
    ATCGGTGGAG GAGCGATCCG GCCTTGTAGC TTGCCCTTTG GAGTAGACCA 
    GTTTGATAAG ACCGACGAAG AAGGTCGAAA GGGACTAAAC AGCTATTATA 
    ATTGGTACTA TGGAACAAGT ACTGCTGCCC TTGTGTTATC TATGATTGTC 
    ATCATCTACA TCCAGAACAA TGTCAGCTGG CCAATAGGAT TTGGCATACC 
    CACATTACTC ATGTTTCTCG CCATTATCAT GTTATTTCTG GGTACCAACC 
    TGTACGTCCA TGTACAACCA GAGGGAAGCA TATTTGCTGG AATTGCCCAG 
    GTTTTAGTGG CTTCATTTAA AAAGAGAAAT CTCAAGCTTC CTTGTCCTCA 
    TGATATAAAC CAACAAGGAT TGATGCTCTA CAACCCTCCT TCCAAGGGCA 
    ACCGCGTATT CAGATTGCCA CTTACTTCCC AGTTCAGGTT TCTGAACAAG 
    GGTGCAATTG TAATGGGTGA TGATATAAAT GTTGATGGTT CTGCAAGAAA 
    CTCTTGGGAG CTTTGCAACG TCCAACAAAT AGAGGAGGTC AAATGCTTAA 
    TAAGAATTGT GCCGGTTTGT ATTTCTGGAG TCTTATGCTT TGTCGCATTG 
    GCTCAGCAAT TCACCTATAT AATCTTGCAA ACATTTACAA TGGACTGTCA 
    CTTTGGGACG CACTTTGAAA TCCCAGCAGG CTCTGTTGTA TCCATATCCC 
    TTATTGCCCT AACTCTATTC ATCCCCATTT ATGACCGGAT TTTAGTACCA 
    ATAGCTAGAG GATTCACTGG AGTGGAAAGT GGTATTACAC TTCTACAGAG 
    ACAGGGTATA GGATTGGCCA TTTCTCCCAT TTCAATGGTG GTAGCAGGAC 
    TTGTCGAACG TAAGAGGAGG AACTCAGCCT TGTCGAATGG AGGAATATCG 
    CCTATGTCAG TCTTGTGGCT TGCACCCCAA CTTGTTTTAA TGGGTATTGC 
    TGAGGCCTTC AATGCAGTTG GACAAATAGA ATTCTACAAT AAGCAGTTTC 
    CAGAGAACAT GCAAACCCTA GCAGGATCTC TGTTCTTCTG TACTATAGCT 
    GGAGCAAACT ACCTGAGTAC TGCTCTGGCA AACATCATGA GAAAGGTCAC 
    GACCAGAGAT GGTCACTCAA GCTGGTTAAC AGACAACATT AATCTTGGCA 
    AACTCGACTA TTACTTCTAT TTTATTGCCC TTATGGGAGT CCTGAACCTT 
    ATTTATTTTC TTATATGCTC ACACTTCTAC CAATATAAGG TAATGTCACT 
    CCATTCTGAA GAATCCATCA AAATACCTAC CAAGGAAGAA GAAGCCACAG 
    AGATCGACAT TGACACAGAT GCACCTAGCA AATGAATAGT GCAACTGCGA 
    GTCTAATTGA TCTGGCACAA GGAATATACT TTTGGACATG GTGACATATT 
    CAAATTCCAA TTTCGAATTC ACTTTAGAAG AGGCTCTAAT GTTTGTAACA 
    TCAAACAGAC CTCTGTGTCA TCTTATGGAT GTGACAAAAA CAAGTGTACC 
    ATAGCAAGGG GGTGACATGT TATCTAGCAA ACATGAATAA AGAGTTTAAA 
    TGGCCTGTCC TGTTGTATTC GAAGTAATGG AGTGTGAGTG ATAGCTTATG 
    AAACTTAAAC AAGTCCATAA TGGTTATGCG ACAAGTAAGC ACAGGTCATA 
    CACCATCTTT TTCT

    Gene models with high sequence identity

    1. AT1G69870.1 [+] show detail - nitrate transporter 1.7
      E-value: 2e-157; Score: 553.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Oligopeptide transporter 2.2e-59
    HMMPanther NITRATE TRANSPORTER (NRT1) 3.2e-282
    HMMPanther OLIGOPEPTIDE TRANSPORTER-RELATED 3.2e-282
    superfamily Major facilitator superfamily, general substrate transporter 2.7e-15

    See the detailed result >

    AT1G69870.1

    Model type
    Protein coding
    Short Description
    nitrate transporter 1.7
    Curator Summary
    Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.
    Computational Description
    nitrate transporter 1.7 (NRT1.7); FUNCTIONS IN: low affinity nitrate transmembrane transporter activity, transporter activity; INVOLVED IN: oligopeptide transport, response to salt stress, nitrate transport, low affinity nitrate transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.6 (TAIR:AT1G27080.1); Has 4600 Blast hits to 4423 proteins in 820 species: Archae - 0; Bacteria - 1236; Metazoa - 519; Fungi - 428; Plants - 2212; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR