K25916

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K25916

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K25916

Determination of introduced cDNA(s)

J023036G13 - Rice Full-length cDNAs - Original: J023036G13

full reading [+] show sequence

GTCTCTCATC GCCACCACCA CCTCCCACTC CAAGACGCTA GCTGCATTGT 
AGTGAGAGAG AGAGGCGGCC ATGGCGCTGG CGTCGCTGCC GAAGGTGGTG 
ATGGGGTCGG TGGCGTTCGG TGTGTTCTGG ATGCTGGCGG TGTTCCCGTC 
GGTGCCGTTC CTGCCGATCG GGCGGACGGC GGGGGCGCTG CTGGGCGCGG 
TGCTGATGAT CGTGTTCCAC GTGATCAGCG CCGACGACGC CTACGCCTCC 
ATCGACCTCC CCATCCTGGG CCTCCTCTTC GCCACCATGG TCGTCGGCGG 
CTACCTCAAG AACGCCGGCA TGTTCAGGCA CCTGGGCCGG CTGCTGGCGT 
GGCGGAGCCA GGGCGGGCGC GACCTCATGT GCCGCGTCTG CGTCGTCACC 
GCGCTCGCCA GCGCGCTCTT CACCAACGAC ACCTGCTGCG TCGTCCTCAC 
CGAGTTCGTG CTCGAGCTCG CCGCCGAGCG CAACCTCCCG GCGAAGCCGT 
TCCTGCTCGC GCTCGCCACC AGCGCCAACA TCGGCTCCAG CGCGACGCCC 
ATCGGCAACC CGCAGAACCT GGTCATCGCC TTCAACAGCA AGATCTCCTT 
TATTTCCTTC CTCCTCGGCA TCCTCCCCGC CATGCTCGCC GGCATGGGGA 
TCAACATGCT CATGCTGCTC TGCATGTACT GGAAGGAGCT CGACGGCGGC 
GCCTGCAGCC CCGACGAGGT CGCCGCCGGC AAGCAGATGG AGGCCATCGA 
GGAGGGCCGC CGCACGGCGC TCAACAACAA CAAGAAAGAC GACGGCGACG 
CCGCCACCCC CGCATCGCCG GAGGACGACG ACGGCGGCGA CGCCGAGTCG 
ATGATGTCGG AGAACATCTC GACGAAGCAC CGGTGGTTCA TGCAGTGCTC 
GGAGCACCGG CGGAAGCTGT TCCTCAAGAG CTTCGCGTAC GTGGTCACCG 
TCGGCATGCT CGTCGCCTAC ATGCTCGGCC TCAACATGTC GTGGACCGCC 
ATCACGACCG CCATCGCCCT CGTCGTCGTC GACTTCCGCG ACGCCGAGCC 
ATGCCTCGAC AAGGTGTCGT ACTCGCTGCT GGTGTTCTTC TCGGGGATGT 
TCGTGACGGT GAGCGGGTTC AACAAGACGG GGCTACCCGG GGCCATCTGG 
AACGTGATGG CGCCCTACTC AAAGATCAAC CACGTCACCG GCGTCACCGT 
CCTCTCCGTC ATCATCCTCC TCCTCTCCAA CCTCGCCTCC AACGTCCCCA 
CCGTGTTGTT GATGGGGGAT GAGGTGGCGG CGGCGGCGGC GACGATATCA 
CCGGCGGCGG TGACGCGGTC GTGGCTGCTG CTGGCGTGGG TGAGCACGGT 
GGCGGGGAAC CTGTCGCTGC TGGGGTCGGC GGCGAACCTG ATCGTGTGCG 
AGCAGGCGAG GCGGGCGACG CGCAACGCCT ACGACCTCAC CTTCTGGAAC 
CACGTCATCT TCGGACTCCC ATCCACCCTC GTCGTCACCG CCATCGGCAT 
CCCTCTCATC GGCAAGATCA ACATCTAGTA TTCATTAAAT TAATTAATTA 
ATATAATCCG GCTAGCTACT ATCTACAACG ATCAGAAGAA GGCAGAATGA 
TCGAGCATGC AAGAATTCAT GCAAATTACA AGGGATGTGA TATGATCATA 
TTAATCCAAG GAAGCTAGTA TGATGATTAA GTTTGTGATC AAGCCGTACT 
ATGTGCATGC CAATGCATGC ATGTGTTCAA GTGTACACTA TGCTTGGTCT 
CAAGTGGATC AATTATATTG GTGCCATGCT CTGGGATAAT TAGTTAATTA 
GTACTTATGA TAAGCTAGAG AGGAGGATGC ATTATATTGG TGCATGGTAA 
TAAGGCAAAT GAACAGCAGA ATGCATGTAT ATATGTACTG TATCCCTGTT 
GCCAGCTGGT CTCTGTTTGA ATGAAGTTGA TAGCAACAAA GCTAGCACTA 
GCGAATGAGC TAGTGACTCA AGTACGCATG CCGGATTACC TCATTGCTCC 
AAACTTGCAA TCAGTTTTGA ACTTTTAATA AAGTTAATTT GGCTTTGTGC 
ACTTGTC

Gene models with high sequence identity

AT1G02260.1 [+] show detail - Divalent ion symporter
E-value: 1e-140; Score: 497.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Divalent ion symporter	6e-101
HMMPanther	ARSENITE TRANSPORT PROTEIN	1.5e-193
HMMPanther	CATION TRANSPORTER RELATED	1.5e-193

See the detailed result >

AT1G02260.1

Model type: Protein coding
Short Description: Divalent ion symporter
Computational Description: Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink).
Link: InterPro Scan - TAIR