K26009

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26009

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26009

Determination of introduced cDNA(s)

J023056A16 - Rice Full-length cDNAs - Original: J023056A16

full reading [+] show sequence

GGTTGGCGAG CTGCTCGTCG GCGGGCGGCG GACGGCGGCG GCGCTCCGGT 
GGTGGGCGCC CTAGTAGGCT AGTGCTCTGC CTCCAACTCC CCTGATTTGG 
CAGCGATTGA TGCCGTCCGC CATGAAGCCG AGCTCGGCCG GCGGTGGCAA 
GTGGCCGCAA TAGCCCTGGC TGGATCTGGA GACGTCGGCA ACAATGGCGG 
CGCCGGACGG CGATGCCACT CCTCCGTCCT GCTCGTCTAA TTGGCGATCC 
AAAGGTCATT TTGTCTAGTA TGCAGACTGT TCAACTAAAA ATACACGTGC 
TTGTGAAACT TGACCAGAGA TCTATGGTGC TGAACTAAAC TTGTAGAATT 
TCCTTTGCTG CTGTCGTCGT CTCAGCTATG TGGTCAATCT TCGACGGTTA 
TATTAATCCA AACCGCAGGG AAAAATACAA ACTTGAATTC AAACAGTTTA 
CATTCAAAAG CATATCTAGG TTCAGACACA TTAAAAGATT TTCAGACTAC 
AAAGTTTCTC TCAGGTCCCA GATCTTGTTG ATCCGTTGAG TAATCCACAA 
AGTTAGAGAC TACACAGTTT CACATGGAGA TATTTCTGTC TGCCATTCTG 
GGTGATCTTG CCAGTAGATC CATATCATTC CTGATCAACA AGTGCTCGAA 
ACCGACAGTG CTAACCGTGG AGGAGAAACT GCAACGGCTG CTGCTCCAGG 
CATGTTTCAT CGTGGAGGAG TCAGATGAAC GGCTCATCAT AAACCAAGCC 
ATGCTGCAGC AACTGAACAT ACTAAGGAAG GAGATGTACA GAGGTTATTA 
TACCCTCGAC AGCTTCAGAT GCCATGGTCA TCAAGAATAT AATCCCAAAG 
ATCTTGAGGT GAGTAGCTCT TTTGCACCAT CGATGTTCAA TCCTGCCAAG 
CGTGTCCGGT TCTGCAGGGT CACTGGCCAG AGAGTACAAG AGCATCTGCT 
GCAACAAGTT TTTGGCAGAC TTGAAGTCAC CATTGAAGAT ATGAGTGAAT 
TTGTTATGTT CCTGAATAGT TATCCACGCT TTTGCCGTCA GCCATATAGC 
ATGCACTTGC TTTTAGACGA GTGCTTGTTC AGTCGCCAAA TGGAGATGGA 
GCACATCATG AACTTCCTGC TGAAAGAGGA TACCACCGGT ACTGAAAATC 
CAGGTGTCCT GCCGATCATA GGTCCAGGAA AAGTTGGGAA GAGCACCCTG 
ATTGAACATG CCTGTGACGA CGAAAGGGTG CGTAACCACT TCTCTCAAAT 
TGTGCTTTTC AATGACGACG ATCTTGAAGA TGCAAACATA TTGACTCTTA 
GAGATTCTGG TGTAATCAAG CATCAAAACC ATGCCACTGG TGGAAAAAGG 
ATACTAATCA TTATTGAACT AACCAGAGAT ATCAATGAGG GTGCATGGAG 
AAGATTGTAC TCAGCTTCAA AAAGTCATGT TGCAAGTGGT AGCAAAATTA 
TAGTCGCAAG CCGATCTGAA AAGATTGCAA GCTTTGGAAC CACACAAGCT 
CTTAGAGTAA AATTCTTTAC TCAAGAAGCT TACTGGTACT TTTTCAAGGT 
TCGCACATTT GGGAGCATAA ACGCAGTGGA GCACCCAAAG CTGGCATCAG 
TAGCCATGGA TATTGCCAGG GAATTGAATG GTTGCTTCAT GGGTGCAAGC 
ATCTACAGTG GACTTCTGAA AGCAAATATC AACTTTCAGT TTTGGAGGAG 
GGCTCTGGCC ATAATCAGAG AATTCAAGAA GCTCAATCTC TTACTCTACG 
GTGCATATTT TTTTGATGAT CCTTGGCAGG CAGTTGAACC ATCATATATT 
AGGACCGTAA ACAAAATTAA CTCGGAATAT CTTCTTGTTC TTGACGACTA 
TCAAATATGT TCTGCTCCGA ACATGATTCA TTGTCACAAA AACTCTGCTC 
ACAGTGAAGA TGAAGTTCCC ATGGTGAATG TGAAAGATTT TCTATTTGGA 
AATGTTAAAC CTCAAGGAAA ATTCAAGGTT CTCGCCTGGA GATCTCACCT 
TCAACCTCAC TACAGTTACG TGTTCAACTG TGAGGTAAAG AGGTTACATC 
ATATGGTCAC CAGAAAGAAG AGATCTCAGA AGCTCTGTAC CTGACCATCT 
CATTGTTCTC TGAAACTGAT GCATAATGTA ATTATCTTAA ATTTTAATAT 
AAATCTGAGC ATTTGTGAAA TAGTTTGACC TACTGTCTGA GCAAATGCGT 
AGTCCAAACT CGTATGTAAA ATGTGCTATT TGTAAGAGAT TGTCAAACTG 
AAGTCTATCA GCATCTACTA ACATTCTATA TTTG

Gene models with high sequence identity

AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
E-value: 0.00000000007; Score: 66.60

InterPro Scan Digest

Program	Description	E-value
HMMPfam	NB-ARC	0.00000000000037
superfamily	P-loop containing nucleoside triphosphate hyd	0.0000093

See the detailed result >

AT3G14470.1

Model type: Protein coding
Short Description: NB-ARC domain-containing disease resistance protein
Computational Description: NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
Link: InterPro Scan - TAIR