K26021

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26021

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26021

Determination of introduced cDNA(s)

  • J013001L09 - Rice Full-length cDNAs - Original: J013001L09

    full reading [+] show sequence

    Nucleotide sequence: J013001L09 - full reading 
    GACTGTGCTC ATGGCTTCCT CTTCCTCCTC CCTTGGCCTT GGCGCCATCT 
    TCCAAAGCGG CTGCCCCCTC CTCCCGCCTC GCCCCGCCGT CCGCCGCGCG 
    CCCACCAGGC GCCGCGCCGT CGCCACCAAG ATCTCCTGCA TCGGATGGGA 
    CCCCGAGGGC GTCCTCGGCC CGCCGCAGGG CGGCCACATC GTGCGCCTCG 
    AGTTCCGCCG CCGCCTCGAG AGGGACTCCG ACGCCCGCGA GGCCTTCGAG 
    CGCCAGGTCC GCGAGGAGCA CGAGCGACGC CGCCAGGAGC GCGAGGCGCG 
    GGTCATCCCT GACACGGACG CCGGCCTCGT CGAGTTCTTC CTCGACACGG 
    AGGCGCGCGA GATCGAGGTA GAGATCGGCA GGCTCCGCCC CAGGCTCAAC 
    CAGCCCTTCT TCGACTACAT CCAGCGCGAG ATCGCCCAGA TCAAGTTCTC 
    AATCACCCGA ACAGCGGAAA TGGAGGACCG ATTGATCGAG TTGGAAGCGA 
    TGCAAAAGGT TCTGCTTGAG GGAGTGGAGG CCTATGACAA GTTGCAAAAT 
    GACCTTGTCA GCGCGAAGGA ACGCCTCACA AAGATCCTGC AATCAAGCGA 
    CAAAAAATCG ACACTTCTTG AAATGGTTGA ACGGAATGAG CTCAACATGT 
    CCATACTAAC ACTCCTCGAT GAAAATATAG CAAGCGCCAA GACCAACAAT 
    CAGGAAGAAG CTGTGGCTTT CATGGAGAAT GTTCGCTCAT CCATCCTGAA 
    ATATATTACA GTATGAAATT GGTAGGCATG TGGACTTAGC CCTGTCACAT 
    GGTTATCAAA ATTAGGTCAT GAACCTGTAA TTTGCAAGGA CATGTCACAT 
    ATTCAAGGGT CTGATTATGT TTCTCTCTTG TATTTAGTTA TTGTGTTCCA 
    TATATGCTCA TGTCAGTGTC AATAGTTTTT TGGTAAAGAG AAATTGTACA 
    ATCATATACT TGTACCACCA ACATATACTT GAACCAGTTT CCTGGTTGGA 
    CAGCTAGTTT TACCTGTTGC

    Gene models with high sequence identity

    1. AT1G62780.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 1e-65; Score: 247.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G62780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR