K26101

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26101

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26101

Determination of introduced cDNA(s)

  • J013051L04 - Rice Full-length cDNAs - Original: J013051L04

    full reading [+] show sequence

    Nucleotide sequence: J013051L04 - full reading 
    GCTCCCCCAA CAACTCGGCC AAATTCAAAG CAAAGCCGCC ATTACTGCTC 
    CTCTTCCATT CCACTGGGGA CGTACGAGCT CCGCGCATCC CTTCCATTCC 
    ATTACTGACC TTGGCTGCTG CGGCTGCAGT GCAGAGGGGG TTTGGTGGTG 
    CGGTTGATTT GAGCAATAAA TTCTCTAGGG GGGAGGGAGG TATCGGTCAT 
    GGCTGCCGCT GCTGCAAGGA GGGGCTCATC GCTGCTCTCT CGCTGCCTGC 
    TGTCCAGGCC CGCCGCCGCC GCCTCGCCTG CTGTCCCCTC TGCGCTCCGC 
    AGGGCAGATG GGACACAAGG ATTGTTGCCG GGAATCCTTC AGAGGTTCAG 
    CACTGCAGCA GTAGCAGAGG AGCCCATATC ACCCCCAGTC CAAGTGAACT 
    ACACTCAGCT CCTCATTGAT GGAAAATTCG TTGATTCAGC ATCTGGCAAA 
    ACTTTCCCAA CTCTGGACCC TCGTACCGGG GAGCTGATTG CCCATGTGGC 
    TGAAGGCGAT GCGGAGGATA TTAACCGTGC GGTTCATGCG GCCCGCAAGG 
    CTTTCGATGA AGGGCCATGG CCAAAGATGA CTGCCTATGA GAGATCCCGG 
    ATTCTGTTGC GGTTTGCTGA CTTGATTGAG AAGCACAACG ATGAAATTGC 
    TGCATTGGAG ACATGGGACA ACGGCAAGCC GTATGCGCAA GCTGCCAACA 
    TTGAAGTGCC AATGGTGGCA CGGCTGATGC GGTACTATGC TGGTTGGGCT 
    GACAAGATCC ATGGGCTTGT CGTGCCGGCT GACGGCCCAC ACCATGTACA 
    GGTGCTGCAC GAGCCCATTG GTGTCGCAGG TCAGATCATC CCATGGAACT 
    TTCCGCTTCT GATGTTTGCG TGGAAAGTTG GCCCTGCTTT GGCTTGTGGA 
    AACACTGTTG TGCTCAAGAC GGCTGAGCAA ACTCCTCTGT CTGCTCTATT 
    TGCTTCTAAG CTGTTGCATG AGGCTGGACT CCCAGACGGT GTTGTTAACG 
    TGGTATCTGG TTTTGGACCT ACTGCTGGTG CTGCTCTTGC TAGTCACATG 
    GATGTCGATA AGATTGCATT CACTGGATCG ACCGATACTG GAAAAGTCGT 
    CCTTGAGTTG GCTGCAAGGA GCAACCTTAA GTCAGTGACA CTGGAGCTAG 
    GAGGCAAGTC TCCTTTCATC ATCATGGATG ATGCTGATGT TGACCATGCT 
    GTTGAGCTTG CGCATTTTGC ACTGTTCTTT AACCAGGGAC AATGTTGCTG 
    TGCTGGGTCT CGTACATTTG TGCATGAGCG TATCTATGAT GAGTTCGTGG 
    AGAAGGCCAA GGCTCGTGCT CTCAAGCGTG TGGTTGGTGA TCCATTCAAG 
    AATGGTGTTG AACAGGGCCC TCAGATTGAT GACGAGCAAT TCAACAAGAT 
    CTTGCGCTAC ATCAAGTATG GTGTTGACAG TGGAGCCAAC CTTGTGACTG 
    GTGGCGACAG ATTAGGTGAC AAAGGTTACT ACATCCAGCC AACAATTTTC 
    TCGGATGTAC AGGATAACAT GAGGATTGCT CAAGAAGAGA TATTTGGCCC 
    TGTGCAGTCC ATTCTGAAGT TCAATGATCT GAACGAGGTC ATCAAGAGGG 
    CAAATGCAAG CCAGTACGGG CTGGCTGCTG GGGTCTTCAC CAACAACCTG 
    AACACGGCCA ACACCCTGAC CCGCGCGCTC AGGGTCGGGA CCGTGTGGGT 
    GAACTGCTTC GACGTCTTCG ACGCCGCGAT CCCGTTCGGC GGATACAAGC 
    AGAGCGGCAT CGGGAGGGAG AAGGGCATCG ACAGCCTGAA GAACTACCTG 
    CAGGTCAAGG CCGTCGTCAC GCCGATCAAG AACGCCGCGT GGTTGTAAAC 
    ACATAGATGT TTGGACATTT CAGAACTGGG GAAGAAATAG GTATAATCTT 
    ATGGACGGAT GCGAAAATGG CGATAAATTA TGGCGATAAG ATTATGATGA 
    TGATGATGAA GAAGAAGAAG AGGAGGAGGA AGAACAGCTG AAATAAGCTT 
    GTCCTAGCAT GGGGCTGGCA TTGTCTCTAA TAAACCTTGT GGTTGGTGCT 
    CATGTTACTG ATGGAGTATA TTGTAGAAGC AGATTTATGT TCATTATGAA 
    ATATATATCG CTTGTTTGGG

    Gene models with high sequence identity

    1. AT1G23800.1 [+] show detail - aldehyde dehydrogenase 2B7
      E-value: 0; Score: 828.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther ALDEHYDE DEHYDROGENASE 2e-292
    HMMPanther Aldehyde dehydrogenase 2e-292
    superfamily Aldehyde/histidinol dehydrogenase 5.9e-191
    Gene3D Aldehyde dehydrogenase, N-terminal 1.7e-110
    HMMPfam Aldehyde dehydrogenase 3.5e-184
    PatternScan Aldehyde dehydrogenase, conserved site 0
    PatternScan Aldehyde dehydrogenase, conserved site 0

    See the detailed result >

    AT1G23800.1

    Model type
    Protein coding
    Short Description
    aldehyde dehydrogenase 2B7
    Curator Summary
    Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.
    Computational Description
    aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR