K26450

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	low saturation (PATO:0000328) (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26450

Determination of introduced cDNA(s)

J033044H03 - Rice Full-length cDNAs - Original: J033044H03

full reading [+] show sequence

GTTCGCGGAA AAAAAATCAG ATCAGGTTCC GCATCCACTC CGCTCCCCGC 
CCCGGCGAGA GGCTGCAGCT CAGCTCATCG CCGGCGGGCA AGCCCGATCT 
CCCCCAACCT GCTCCGCTCC TTGCGCTCTC CCAATCCCGC ATCTCCTCCT 
CCTCCGACCC CGCGAGGTGG GGGTCGGAGG TCGTCGTCGT CGTCGTCGTT 
GTCGCCTGCC TCCTCTCCGG GCGCTCGCTG AGTTTGCCGG CGGCGTGGGC 
TGTGTGCGGT GTGCGGTGTG CGCGCGCGAT TTGTAGCTGG GAGACGCTTG 
ACTTGTTGCC TCCGCTAGCT CTTCTGGCCT TCGTGTCGAC ATGGCTGCAA 
TGTGATTTGC CGCGCCGCGC GCTGTTCCTC TCTTCTGGAG GGTAAAATGG 
CAGGCAGAGC AAGGTGGGTA GCAAAGTATA CAAAGGGTCT TGTTGATGTG 
CTTCATGAGA ACAATATTTC ACACTACCGT ACCCAGAATG GATGGAGAAC 
CGATGGGTGG AGGAAAATTG TTAGCGAATT CAATGATAGG TACCCAGATG 
CAAAATTTAC TAAAGTTCAA ATTCAGGAGC ATGAGACACA ACTGAAGAGA 
GATTATAGAT TGGTAAAATT AATTCTCCAG CGGGAAGGTG TTACTTGGGA 
TCAAAATGCT TCCATGATTA GAACGACAGA TGAAATCTGG GATGAGATAA 
TTGAGGAGAT GCCCAAGGCG CGGAAGTACC AATTTAAGAG CTTTCCGTTA 
CTTCAATCAC TTGAGGTGTT ATTTGAAGGT GACATTCCTG AAGGGGAACA 
CAACTTAATG CCGAGCAAAC CTCAACTTGC TGGTAGGAAT GTTGATGAGG 
GAGGCAATAA CATGAGCACA GCTCCGAGCA TACCTGGAAG ACCTTGTAGC 
ACAGTTATTG CCGGCATTGA TGATGGGGAG AACAACATCG GCATACTTCA 
GAGAACTCCA GAGTTAGGGC AACAAGGTCT GGATGATGTT GATATTCTGC 
AAAATCCAAC AGAAGAGGTA CTGGAAAGAC CACAGCACGG TGCCGACCCA 
AAACCACAAA GTGCTGATGA ACCGGCGCAC TCAAGCTCTT GCATAGAACC 
TCAAAAGGAC AAGCGAAAGA AGCGTAAGGT CCCTGACATC CAGCAAACCA 
TGGAGGCTTT TCTGGAGTTC AGAATGAAGC AAGCTCGCTT GAAGGAACAA 
GCGAAGAAGG AGAAGAAGGA TGGTGAGCCG TTCTCGATCT CGACGTGTAT 
CAAGGCACTG CATTCAATGA CCGACGTATC TGATCAGGTC AAGATTCTAG 
CCTCTGATGT TTTCAAGGAT GCAGCGAACC GAGAGATCTT CCTTTCCTAC 
GATCTCAGGC TTCGCACGCT GTGGATCAAG AGGGAAGTCA ACAGGTTACT 
CACTTGATCA AGTGGATTGC CGCATCTTGT TGCCCTTCGT CTCCGGAAGA 
TTAGATGAAC GTAGAAACTA TAATTATTAT GGATCAGCTG AAAGTCATGA 
ACTGATCGAT TTGCTAAAAT TATGGATCGG GTCAGATCTG AACCTAGGAG 
TCATGCAAGT CGTCAAGCAC TCGTTTTCCC TATGCTCAGT GCTTAGTGGC 
ATTGGCTGAC TGGACTGCTG CTCCAGCTCC TGCAGCCGGA GGATGGGACA 
CGGCTGCTGC CCCTGCCCCT GGATGGGAAC AAGGCAGTGC ACCAGTCCCA 
GCGGCAGCAC CAACCCCTAA CTGGGGGGAG TGAGTGAAAG AGTAACTGAT 
CCAGTTCATG GGTCAGAGGC TGAGTTTGTT GTCGGGAGCA GCTGGTAGAC 
ACTATTTAAG TAGCTTTAAT CTTTTTACAG TACTGAGTTA TTTAGATGCA 
AATCAAATTT TGTGTTCTTG ACAATGCTGG GACTGCGAAC TAGCCAGCCT 
TTTTTTTGTT ACAATCTCAT GGATAGCTTT ATTTCAAGAG CAATTCTGCT 
TTGCGAACAA AGTGTATGTG TTTGCAACAA CAAATTGATG GGGTTTTCTC 
CTCATAGTTC TTATTGTTCA CTGTCAGACC

Gene models with high sequence identity

AT2G24960.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 0.000002; Score: 52.00

InterPro Scan Digest

See the detailed result >

AT2G24960.2

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR