K26524

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26524

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flower::Others)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26524

Determination of introduced cDNA(s)

  • J023075L12 - Rice Full-length cDNAs - Original: J023075L12

    full reading [+] show sequence

    Nucleotide sequence: J023075L12 - full reading 
    GTATCCTCTT GCAATTCAAT TCAGATTTCA GTTTCAGATT CAGCTTGCAT 
    TTTGTGAATT TGTGATGTCC TTGCGGCGAC CTCATTTTGT GAATTTGTGA 
    TGTCCTTGAC GCGACCTCCA GCTCTTCTTC TACGTGATGT TCTTGTCGAC 
    GGTGAGGACG AGGAAGACGC ACGATCGCCG GAATTCATGG CACTCCGAGT 
    GGTGGCCGGC GAAGATCGTG CTGTGGATGG GCTTCACCGT CGTCCCCTTC 
    TTCCTCCCCC CGCCTCTCAT CCAGCTCTAC GGGAAGGTCG CGCATTTCGG 
    AGCAGGGTAA GCCCCGCATG CACTTTTTTT TTAATATAAA AGACTATAAC 
    TTCCGGCCTC TACACCAATC AGAGATGCAC ACACGCAACC AACACACGTT 
    TTTCAGCACG TTCAGCTAAA TCAGGTCTCT TTATCGACGT AAACTGATGG 
    ATCATATGAT GCACAATTTT GACAGGGCGT TTCTGGTGAT CTAGCTCGTT 
    TCCATTTAAC AATGGTGATG GCTATATTAT TTTTTCTTCC AACATTGTTA 
    TATTACTATG ATATGTTTGG ATTAGTGGAG CAACGGTGTT TTGAGAATGA 
    TCTCTTAGAC ATTTATCACA TTAGGTGATA TCTTGATTGA TATTTTGTCA 
    TTGGCTTTTG CAGTTCACCC CTGCAATTGA TATTTGGAGC ATAGGATGTA 
    TATTTGCAGA GCTGCTTACA GGAAAGCCAC TCTTTCCAGG GAAAAATGTT 
    GTGCATCAAT TGGATCTCAT GACTGATCTA CTTGGCACTC CAGCAGAATC 
    CCTTGCTAAG ATACGGAATG AGAAAGCTCG ATGATGCCTG AGCAACATGA 
    GGAAAAAGCC TCGGGTTCCT TTTACTAAAA AGTTTCCAGT GGTTTGGAGA 
    TGCTGAGAAG TTGACAAAGG CCCTTTTCTC CTTTGCTAGC CGATTAGCTC 
    CCGTTATCAT ATTTGTGGAT GAGGTTGCAT GATGGTAATC GGAACAAGCT 
    GAAGCTTAAG GATGAGTTTG TACTGCTGGG CTGCTGGCAG CTCAGGTAGA 
    AGAGGTGACT CCTCCATTGA GCTCTACTGC TTTCATAATT GTACTGTACC 
    ATTATTTCAA TTTGAAAAAG TTATGCTTGA TTTGAGCTGT GGTGACATTT 
    GTTCCTGTCA AATGTTGATA ATAATGAACC TATCTAATAC AGGCCTTCAA 
    ATAATTAAAA GTTTCAGAGA TTACTAACCT TAGTTCTCAG GTTAGTTTAT 
    TCAGACCACT TCCGATCCTT TTGGCATGCG ATTATTTTGT GACTCATTTC 
    AGATAGATTG TCTTCAATTC ATCCATTGTG AATATTTGAA TTGCTTCCTT 
    GCACTAAATG TATGCAGGCA TCAAGGTTAG TAGTCTGGCT AATATTGCTC 
    GATTGTTAAT TAATCGTGAC GACCTTATAA AATCTTGACT TTTGTTTCAG 
    AATATGGATA GAACATCATG CTACAACTTT ACCTGCTATT TGGAAACATA 
    GAGACTTTGG ATGTTTCTTC TTATTTTAAC AAGAAAGACA TCAACTTTTT 
    TTTTTTGCTG AAATTTTTCA TTCAGATCTA AACCTCAACA TTTTCTATAC 
    CACAACATAT TGATACTGGG ACAGATGGCC TTGAATGTTT TTCATGACCC 
    AGCAGTTACA TAGGTTATGT TGATTATCCT CATATATGTC TTTTGACTTG 
    TCGGTGTCTT TATTTGATTT ATTATTATCA ACATGCATAA ACTGTCCGGA 
    ATATGAATTT CTCTGCTTTA CAAAAGCTAA CAATATTATG TGGTTTTATG 
    TCCTTAAAAC TCAACTGTTT ATTTCTAAGT GTAATTAATT AATTAATTAG 
    TATGCACTCA TCACTTCATG GTTCTTTTCA TAAGTACGGT TGGACAAATA 
    AGTTCTATAC ATATGGATGT AATTAATTGG CATTTGGTTT CTTCATACCA 
    CCAAACCTGC GATCTATTTG TTCTGTGTCA TATAGATGTC TAGCGGTAGC 
    TTTAACATAT CTTAAAATTT CATACTAATG GTTCTCCAAT TCCCCATGTC 
    ATGCATAAAA GGGTTGCCAT GCTAATACCA AATACAAGTC AGTATAAATA 
    CCAAATACAA GTTAGTATAA ATACCAAATA TGCCGTGATG ACATTTTTTT 
    AACATGTCTT GAGTTTCTCT GGTTTAGACC ATAGACTAAT TTGGTGTTTG 
    TTGTAAAGAA AGGTTGAACA TGGAGTAGGC CCAGGTTATG TCAACTGTCA 
    TCTTAAAATA CTAGAGGATA TGATTTGGTA AAGCTGTAGA GGTTAGTTTA 
    ATCATAAAAA AGTATCATTT TACTTTAGCC ATAATTTGGG ATGTAAAATG 
    AGCGAAAAAA CTCAGTGCTC TGCTGAAATA GTTTGTGAGA GTAAAGTGGA 
    CTTTTTTTTT TTTGTTAAAA CATCGTGAAC AACGAGATGC TTTATAGGTC 
    TTTCTACCAA GTACTGGGAA GAGACATTTA GTTCACTTGT TTAGGGCAGC 
    ACATAAACTT ATCCCTCATA TGTTCTCTTT TATGAATGAT TAGAATGTTG 
    AAGATGTACA CGGCTAGAAA TCTACAGCAG ATAAACACAT TTGAGCAGAT 
    GTACGCCATT TGATGACTTC TTTTTTATGA AATGCCAGTT CGTGATATTG 
    CCTTACAACT TGTTGCAGGG TTATGCCATC CATCTAATGG GAGGTATTAC 
    CAGCGATTTG TGGACAAGCT CTCCATTCTG GATCTCCCTA TTTGGTTAGT 
    TGGATCACAC CGTAGAGAAC GCAATGTAAT ACATCTTTAT TGACATCATT 
    TTTTATTGTT GAAAAATTTC AAATTAACTT AAAAATACAC TGGCATTTGT 
    ATGGTGTGAC AAATTAAAGA ATTAGAGGTG TGCGGT

    Gene models with high sequence identity

    1. AT3G18040.2 [+] show detail - MAP kinase 9
      E-value: 6e-30; Score: 130.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 2.2e-08
    HMMPfam Serine/threonine-protein kinase-like domain 1.9e-08
    HMMPfam TMS membrane protein/tumour differentially expressed protein 4.1e-10
    superfamily Protein kinase-like domain 2.5e-10
    HMMPanther UNCHARACTERIZED 9.1e-25
    HMMPanther TMS membrane protein/tumour differentially expressed protein 9.1e-25
    HMMPanther MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-REL 1.8e-28
    HMMPanther CDC2, MAP KINASE-RELATED 1.8e-28

    See the detailed result >

    AT3G18040.2

    Model type
    Protein coding
    Short Description
    MAP kinase 9
    Curator Summary
    Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.
    Computational Description
    MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR