K26524

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26524

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flower::Others)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26524

Determination of introduced cDNA(s)

  • J023075L12 - Rice Full-length cDNAs - Original: J023075L12

    full reading [+] show sequence

    Nucleotide sequence: J023075L12 - full reading
    GTATCCTCTT GCAATTCAAT TCAGATTTCA GTTTCAGATT CAGCTTGCAT 
    TTTGTGAATT TGTGATGTCC TTGCGGCGAC CTCATTTTGT GAATTTGTGA
    TGTCCTTGAC GCGACCTCCA GCTCTTCTTC TACGTGATGT TCTTGTCGAC
    GGTGAGGACG AGGAAGACGC ACGATCGCCG GAATTCATGG CACTCCGAGT
    GGTGGCCGGC GAAGATCGTG CTGTGGATGG GCTTCACCGT CGTCCCCTTC
    TTCCTCCCCC CGCCTCTCAT CCAGCTCTAC GGGAAGGTCG CGCATTTCGG
    AGCAGGGTAA GCCCCGCATG CACTTTTTTT TTAATATAAA AGACTATAAC
    TTCCGGCCTC TACACCAATC AGAGATGCAC ACACGCAACC AACACACGTT
    TTTCAGCACG TTCAGCTAAA TCAGGTCTCT TTATCGACGT AAACTGATGG
    ATCATATGAT GCACAATTTT GACAGGGCGT TTCTGGTGAT CTAGCTCGTT
    TCCATTTAAC AATGGTGATG GCTATATTAT TTTTTCTTCC AACATTGTTA
    TATTACTATG ATATGTTTGG ATTAGTGGAG CAACGGTGTT TTGAGAATGA
    TCTCTTAGAC ATTTATCACA TTAGGTGATA TCTTGATTGA TATTTTGTCA
    TTGGCTTTTG CAGTTCACCC CTGCAATTGA TATTTGGAGC ATAGGATGTA
    TATTTGCAGA GCTGCTTACA GGAAAGCCAC TCTTTCCAGG GAAAAATGTT
    GTGCATCAAT TGGATCTCAT GACTGATCTA CTTGGCACTC CAGCAGAATC
    CCTTGCTAAG ATACGGAATG AGAAAGCTCG ATGATGCCTG AGCAACATGA
    GGAAAAAGCC TCGGGTTCCT TTTACTAAAA AGTTTCCAGT GGTTTGGAGA
    TGCTGAGAAG TTGACAAAGG CCCTTTTCTC CTTTGCTAGC CGATTAGCTC
    CCGTTATCAT ATTTGTGGAT GAGGTTGCAT GATGGTAATC GGAACAAGCT
    GAAGCTTAAG GATGAGTTTG TACTGCTGGG CTGCTGGCAG CTCAGGTAGA
    AGAGGTGACT CCTCCATTGA GCTCTACTGC TTTCATAATT GTACTGTACC
    ATTATTTCAA TTTGAAAAAG TTATGCTTGA TTTGAGCTGT GGTGACATTT
    GTTCCTGTCA AATGTTGATA ATAATGAACC TATCTAATAC AGGCCTTCAA
    ATAATTAAAA GTTTCAGAGA TTACTAACCT TAGTTCTCAG GTTAGTTTAT
    TCAGACCACT TCCGATCCTT TTGGCATGCG ATTATTTTGT GACTCATTTC
    AGATAGATTG TCTTCAATTC ATCCATTGTG AATATTTGAA TTGCTTCCTT
    GCACTAAATG TATGCAGGCA TCAAGGTTAG TAGTCTGGCT AATATTGCTC
    GATTGTTAAT TAATCGTGAC GACCTTATAA AATCTTGACT TTTGTTTCAG
    AATATGGATA GAACATCATG CTACAACTTT ACCTGCTATT TGGAAACATA
    GAGACTTTGG ATGTTTCTTC TTATTTTAAC AAGAAAGACA TCAACTTTTT
    TTTTTTGCTG AAATTTTTCA TTCAGATCTA AACCTCAACA TTTTCTATAC
    CACAACATAT TGATACTGGG ACAGATGGCC TTGAATGTTT TTCATGACCC
    AGCAGTTACA TAGGTTATGT TGATTATCCT CATATATGTC TTTTGACTTG
    TCGGTGTCTT TATTTGATTT ATTATTATCA ACATGCATAA ACTGTCCGGA
    ATATGAATTT CTCTGCTTTA CAAAAGCTAA CAATATTATG TGGTTTTATG
    TCCTTAAAAC TCAACTGTTT ATTTCTAAGT GTAATTAATT AATTAATTAG
    TATGCACTCA TCACTTCATG GTTCTTTTCA TAAGTACGGT TGGACAAATA
    AGTTCTATAC ATATGGATGT AATTAATTGG CATTTGGTTT CTTCATACCA
    CCAAACCTGC GATCTATTTG TTCTGTGTCA TATAGATGTC TAGCGGTAGC
    TTTAACATAT CTTAAAATTT CATACTAATG GTTCTCCAAT TCCCCATGTC
    ATGCATAAAA GGGTTGCCAT GCTAATACCA AATACAAGTC AGTATAAATA
    CCAAATACAA GTTAGTATAA ATACCAAATA TGCCGTGATG ACATTTTTTT
    AACATGTCTT GAGTTTCTCT GGTTTAGACC ATAGACTAAT TTGGTGTTTG
    TTGTAAAGAA AGGTTGAACA TGGAGTAGGC CCAGGTTATG TCAACTGTCA
    TCTTAAAATA CTAGAGGATA TGATTTGGTA AAGCTGTAGA GGTTAGTTTA
    ATCATAAAAA AGTATCATTT TACTTTAGCC ATAATTTGGG ATGTAAAATG
    AGCGAAAAAA CTCAGTGCTC TGCTGAAATA GTTTGTGAGA GTAAAGTGGA
    CTTTTTTTTT TTTGTTAAAA CATCGTGAAC AACGAGATGC TTTATAGGTC
    TTTCTACCAA GTACTGGGAA GAGACATTTA GTTCACTTGT TTAGGGCAGC
    ACATAAACTT ATCCCTCATA TGTTCTCTTT TATGAATGAT TAGAATGTTG
    AAGATGTACA CGGCTAGAAA TCTACAGCAG ATAAACACAT TTGAGCAGAT
    GTACGCCATT TGATGACTTC TTTTTTATGA AATGCCAGTT CGTGATATTG
    CCTTACAACT TGTTGCAGGG TTATGCCATC CATCTAATGG GAGGTATTAC
    CAGCGATTTG TGGACAAGCT CTCCATTCTG GATCTCCCTA TTTGGTTAGT
    TGGATCACAC CGTAGAGAAC GCAATGTAAT ACATCTTTAT TGACATCATT
    TTTTATTGTT GAAAAATTTC AAATTAACTT AAAAATACAC TGGCATTTGT
    ATGGTGTGAC AAATTAAAGA ATTAGAGGTG TGCGGT

    Gene models with high sequence identity

    1. AT3G18040.2 [+] show detail - MAP kinase 9
      E-value: 6e-30; Score: 130.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 2.2e-08
    HMMPfam Serine/threonine-protein kinase-like domain 1.9e-08
    HMMPfam TMS membrane protein/tumour differentially expressed protein 4.1e-10
    superfamily Protein kinase-like domain 2.5e-10
    HMMPanther UNCHARACTERIZED 9.1e-25
    HMMPanther TMS membrane protein/tumour differentially expressed protein 9.1e-25
    HMMPanther MITOGEN-ACTIVATED PROTEIN KINASE 7 (ERK5)-REL 1.8e-28
    HMMPanther CDC2, MAP KINASE-RELATED 1.8e-28

    See the detailed result >

    AT3G18040.2

    Model type
    Protein coding
    Short Description
    MAP kinase 9
    Curator Summary
    Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling.
    Computational Description
    MAP kinase 9 (MPK9); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR