K26542

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26542

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26542

Determination of introduced cDNA(s)

  • J033121J02 - Rice Full-length cDNAs - Original: J033121J02

    full reading [+] show sequence

    Nucleotide sequence: J033121J02 - full reading 
    AGATTCTGCT AAGCTGCCCA CGGCCATGGA GTCGCCGCTG AGCCATCCGG 
    CGATGGTCGC CTTGTCGCTG CTGCTACTCG TGGCGCTCTA CCTCGCGCGC 
    CGCGCCGTGC TGGGGAAGAA ACGCAGGTAT CCGCCCGTGG CCGGCACCAT 
    GTTCCACCAG CTGCTCAACT TCGGCCGCTT GCTGGAGTAC CACACGGAGC 
    TCTCCCGCAA GTACCGCACC TTCCGCATGC TCACCCCGAC CTGCAACTAC 
    GTCTACACCG TCGAGCCGGC CAACGTCGAG CACATCCTCA AGACCAACTT 
    CGCCAACTAC GGCAAGGGCC CGATGACCCA CGACGTGCTG GAGGACCTCC 
    TCGGCGACGG GATCTTCAAC GTGGACGGCG GCATGTGGCG GCAGCAGCGC 
    AAGGTCGCCA GCCTCGAGTT CTCCACCCGT GTGCTGCGGG ACTACAGCAG 
    CGCCGTGTTC CGCGACACCG CCGCGGAGCT CGCCGGCATC CTGGAGCGTG 
    GTCCGGCGGC GAAGGGGCGG GAGAGGGTGG ACATGCAGGA TCTGCTGATG 
    CGGGCGACGC TGGACTCTTT CTTCAGGGTT GGTTTCGGGG TCAACCTTGG 
    CGTGCTCTCC GGATCCAGCA AGGAGGGCTT GGTGTTTGCC AGGGCGTTCG 
    ACGACGCGAG CGAGCAGGTG CTGTTCCGAT TCTTCGACCT GCTCTGGAAG 
    GTCAAGAGGT TTCTCAACAT CTCGTCGGAG GCAACCATGA AGCAGTCGAT 
    CCGCACCATC AACGACTTCG TGTACTCCAT CATCGACAGG AAGATCGAAC 
    AGATGAGCAG AGAGCAACAC GAATTCGCCA AGAAAGAGGA CATACTGTCG 
    AGGTTTCTGC TCGAGAGGGA GAAGGATCCC GGCTGCTTCG ACAACAAGTA 
    CATCAGGGAC ATCATACTCA ACTTCGTCAT CGCCGGCCGC GACACGACGG 
    CGGGGACGCT GTCGTGGTTC CTCTACGCCG TCTGCAAGAA CCAGCGCGTA 
    CAGGACAAGA TCGCGAGGGA AGTGCGCGAC GCCACCACCG GCGACCGCGA 
    CGTCGGCGTC CAGGATTTCT CTTCATTTCT GACAGAAGAC GCCATCAACA 
    AGATGCAGTA CCTACACGCA GCGTTGACGG AGACGCTCCG GTTGTACCCT 
    GGCGTTCCCC TCGATGTCAA ATACTGCTTC TCGGATGACA CGTTGCCGGA 
    CGGGCACGCG GTGAAGAAAG GAGACATGGT GAACTACCAA CCGTACCCCA 
    TGGGCAGGAT GAAGTTCCTG TGGGGCGACG ACGCCGAGGA GTTCAAGCCG 
    GAGCGGTGGC TCGATGACAG TGGTATGTTC GTCGCCGAGA GCCCCTTCAA 
    GTTCACGGCG TTCCAGGCGG GGCCACGAAT CTGCTTGGGG AAGGAGTTCG 
    CGTACAGGCA GATGAAGATC GTTTCGGCTG TCCTTCTCTA CTTCTTCAGA 
    TTCGAGATGT GGGATGACGA CGCCACCGTG GGTTATAGGC CGATGCTGAC 
    TCTGAAAATG GATGGCCCGT TCTATCTCCG CGCATTGGCC CGGTGAAGCT 
    TCACACCATA TCAAAAGTTC AAAACTCAAG GGCGGCGCTG GTCTATTTCA 
    TCCATTTTGG CGGGGATAAT GACGGTTAGA TATGGTTGTC GAAGACAACA 
    GTGCTCCTAA GGTGTAGGTA TGTAAGAAAA ATAACGTGTG TATTATACTC 
    TTAAAAACTT TTTACTAGAG GGCTATGTGT ACTCCCTCCG TTCCACGTAA 
    TAAGACACGA TCAAACATGA CACCATCACC

    Gene models with high sequence identity

    1. AT2G45510.1 [+] show detail - cytochrome P450, family 704, subfamily A, polypeptide 2
      E-value: 3e-145; Score: 512.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CYTOCHROME P450, SUBFAMILY 86A, B 6.5e-169
    HMMPanther Cytochrome P450 6.5e-169
    superfamily Cytochrome P450 6.8e-101
    Gene3D Cytochrome P450 2.4e-91
    FPrintScan Cytochrome P450, E-class, group I 3.5e-12
    FPrintScan Cytochrome P450, E-class, group I 3.5e-12
    FPrintScan Cytochrome P450, E-class, group I 3.5e-12
    FPrintScan Cytochrome P450, E-class, group I 3.5e-12
    FPrintScan Cytochrome P450, E-class, group I 3.5e-12
    FPrintScan Cytochrome P450, C-terminal 5.7e-11
    FPrintScan Cytochrome P450, C-terminal 5.7e-11
    FPrintScan Cytochrome P450, C-terminal 5.7e-11
    FPrintScan Cytochrome P450, C-terminal 5.7e-11
    HMMPfam Cytochrome P450 1.7e-71

    See the detailed result >

    AT2G45510.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 704, subfamily A, polypeptide 2
    Curator Summary
    member of CYP704A
    Computational Description
    "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR