K26739

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26739

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26739

Determination of introduced cDNA(s)

  • J033052H03 - Rice Full-length cDNAs - Original: J033052H03

    full reading [+] show sequence

    Nucleotide sequence: J033052H03 - full reading 
    GGGGCCAAAA TACCGGACCA CAAGCAGTAA CTGGAAGTGG ATCAACATCA 
    TCCGTCTGCT ATAGTCTACT AGTACTTGCA TTGCGGGGAG GGAGACACCT 
    ATTCTGCTAA GCTGCCCACG GCCATGGAGT CGCCGCTGAG CCATCCGGCG 
    ATGGTCGCCT TGTCGCTGCT GCTACTCGTG GCGCTCTACC TCGCGCGCCG 
    CGCCGTGCTG GGGAAGAAAC GCAGGTATCC GCCCGTGGCC GGCACCATGT 
    TCCACCAGCT GCTCAACTTC GGCCGCTTGC TGGAGTACCA CACGGAGCTC 
    TCCCGCAAGT ACCGCACCTT CCGCATGCTC ACCCCGACCT GCAACTACGT 
    CTACACCGTC GAGCCGGCCA ACGTCGAGCA CATCCTCAAG ACCAACTTCG 
    CCAACTACGG CAAGGGCCCG ATGACCCACG ACGTGCTGGA GGACCTCCTC 
    GGCGACGGGA TCTTCAACGT GGACGGCGGC ATGTGGCGGC AGCAGCGCAA 
    GGTCGCCAGC CTCGAGTTCT CCACCCGTGT GCTGCGGGAC TACAGCAGCG 
    CCGTGTTCCG CGACACCGCC GCGGAGCTCG CCGGCATCCT GGAGCGTGGT 
    CCGGCGGCGA AGGGGCGGGA GAGGGTGGAC ATGCAGGATC TGCTGATGCG 
    GGCGACGCTG GACTCTTTCT TCAGGGTTGG TTTCGGGGTC AACCTTGGCG 
    TGCTCTCCGG ATCCAGCAAG GAGGGCTTGG TGTTTGCCAG GGCGTTCGAC 
    GACGCGAGCG AGCAGGTGCT GTTCCGATTC TTCGACCTGC TCTGGAAGGT 
    CAAGAGGTTT CTCAACATCT CGTCGGAGGC AACCATGAAG CAGTCGATCC 
    GCACCATCAA CGACTTCGTG TACTCCATCA TCGACAGGAA GATCGAACAG 
    ATGAGCAGAG AGCAACACGA ATTCGCCAAG AAAGAGGACA TACTGTCGAG 
    GTTTCTGCTC GAGAGGGAGA AGGATCCCGG CTGCTTCGAC AACAAGTACA 
    TCAGGGACAT CATACTCAAC TTCGTCATCG CCGGCCGCGA CACGACGGCG 
    GGGACGCTGT CGTGGTTCCT CTACGCCGTC TGCAAGAACC AGCGCGTACA 
    GGACAAGATC GCGAGGGAAG TGCGCGACGC CACCACCGGC GACCGCGACG 
    TCGGCGTCCA GGATTTCTCT TCATTTCTGA CAGAAGACGC CATCAACAAG 
    ATGCAGTACC TACACGCAGC GTTGACGGAG ACGCTCCGGT TGTACCCTGG 
    CGTTCCCCTC GATGTCAAAT ACTGCTTCTC GGATGACACG TTGCCGGACG 
    GGCACGCGGT GAAGAAAGGA GACATGGTGA ACTACCAACC GTACCCCATG 
    GGCAGGATGA AGTTCCTGTG GGGCGACGAC GCCGAGGAGT TCAAGCCGGA 
    GCGGTGGCTC GATGACAGTG GTATGTTCGT CGCCGAGAGC CCCTTCAAGT 
    TCACGGCGTT CCAGGCGGGG CCACGAATCT GCTTGGGGAA GGAGTTCGCG 
    TACAGGCAGA TGAAGATCGT TTCGGCTGTC CTTCTCTACT TCTTCAGATT 
    CGAGATGTGG GATGACGACG CCACCGTGGG TTATAGGCCG ATGCTGACTC 
    TGAAAATGGA TGGCCCGTTC TATCTCCGCG CATTGGCCCG GTGAAGCTTC 
    ACACCATATC AAAAGTTCAA AACTCAAGGG CGGCGCTGGT CTATTTCATC 
    CATTTTGGCG GGGATAATGA CGGTTAGATA TGGTTGTCGA AGACAACAGT 
    GCTCCTAAGG TGTAGGTATG TAAGAAAAAT AACGTGTGTA TTATACTCTT 
    AAAAACTTTT TACTAGAGGG CTATGTGTAC TCCCTCCGTT CCACGTAATA 
    AGACACGATC AAACATGACA CCATCATCAA AATTAATCTG ACTTTAAATT 
    TATC

    Gene models with high sequence identity

    1. AT2G45510.1 [+] show detail - cytochrome P450, family 704, subfamily A, polypeptide 2
      E-value: 3e-145; Score: 512.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CYTOCHROME P450, SUBFAMILY 86A, B 6.5e-169
    HMMPanther Cytochrome P450 6.5e-169
    HMMPfam Cytochrome P450 1.8e-71
    Gene3D Cytochrome P450 2.4e-91
    superfamily Cytochrome P450 6.8e-101
    FPrintScan Cytochrome P450, E-class, group I 3.8e-12
    FPrintScan Cytochrome P450, E-class, group I 3.8e-12
    FPrintScan Cytochrome P450, E-class, group I 3.8e-12
    FPrintScan Cytochrome P450, E-class, group I 3.8e-12
    FPrintScan Cytochrome P450, E-class, group I 3.8e-12
    FPrintScan Cytochrome P450, C-terminal 6.1e-11
    FPrintScan Cytochrome P450, C-terminal 6.1e-11
    FPrintScan Cytochrome P450, C-terminal 6.1e-11
    FPrintScan Cytochrome P450, C-terminal 6.1e-11

    See the detailed result >

    AT2G45510.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 704, subfamily A, polypeptide 2
    Curator Summary
    member of CYP704A
    Computational Description
    "cytochrome P450, family 704, subfamily A, polypeptide 2" (CYP704A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 704, subfamily A, polypeptide 1 (TAIR:AT2G44890.1); Has 29367 Blast hits to 29266 proteins in 1497 species: Archae - 44; Bacteria - 2694; Metazoa - 10887; Fungi - 6277; Plants - 8316; Viruses - 3; Other Eukaryotes - 1146 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR