K26924

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26924

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26924

Determination of introduced cDNA(s)

J033079N16 - Rice Full-length cDNAs - Original: J033079N16

full reading [+] show sequence

GGCTGTCCCC TTCTCCGGAT CCCTTCGAAT TCTGAAATCC CCAAATTCTT 
CTCCGCCTCT CCTCCCCTCC CCCTACAGTA TTTCAAAATA TTTCAAATCA 
CACTACACTC TCCGTCGTCT CCTCTCCTCT CCTCTCCTCC CCCTCTCCTC 
CGCCTCTCTC GCATCTGAGG CTCCGATCGC CGGCGACCCC AGCCAGAATC 
CGCCGCCCCG TCTCGCCCTC CCCGCTCGAC GAGACCGCGC CGAGCGGCGA 
AGAGGCCTAG TGTTCTTCGC ACCTCGCGAT GAGTAGCGCG GTGAAGGACC 
AGCTTCACCA GATGTCGACG ACATGCGATT CGCTTCTACT GGAGCTCAAT 
GTGATTTGGG ATGAGGTCGG TGAGCCCGAC ACGACGAGGG ACAGGATGCT 
GCTGGAGCTC GAGCAGGAGT GCCTGGAGGT CTACAGGCGG AAGGTCGACC 
AGGCGAACCG GAGCCGCGCC CAGCTGCGGA AGGCCATCGC CGAGGGCGAG 
GCAGAGCTCG CCGGCATCTG CTCAGCCATG GGCGAGCCGC CCGTGCACGT 
TAGACAGTCA AATCAGAAGC TTCATGGCTT AAGAGAGGAG TTGAATGCAA 
TTGTTCCGTA TTTGGAAGAA ATGAAAAAGA AAAAGGTCGA ACGATGGAAC 
CAGTTTGTTC ATGTCATAGA GCAGATTAAG AAAATTTCGT CTGAAATAAG 
GCCAGCCGAT TTTGTTCCCT TTAAAGTTCC GGTTGATCAG TCTGACCTGT 
CATTAAGAAA GCTTGATGAG TTGACGAAGG ACCTGGAATC CCTTCAGAAG 
GAGAAGAGCG ATCGGCTAAA GCAAGTGATA GAACATTTGA ATTCTTTGCA 
TTCCTTATGT GAGGTGCTTG GCATAGATTT CAAGCAAACA GTATATGAGG 
TGCACCCTAG CTTGGACGAA GCTGAAGGAT CAAAGAACCT GAGCAACACT 
ACAATTGAGA GGCTTGCTGC TGCCGCAAAC AGACTGCGTG AAATGAAGAT 
CCAAAGGATG CAAAAGCTTC AAGATTTTGC TTCTAGCATG CTCGAGCTAT 
GGAATCTCAT GGATACTCCA CTTGAAGAGC AGCAGATGTT TCAGAATATA 
ACATGCAATA TTGCTGCTTC AGAACAAGAG ATAACTGAAC CAAACACCCT 
CTCCACAGAT TTCCTGAATT ATGTCGAATC TGAGGTGTTA AGGCTTGAAC 
AACTGAAAGC AAGTAAGATG AAAGATCTTG TTTTAAAAAA GAAAGCAGAA 
CTAGAAGAGC ATAGAAGACG TGCTCATCTT GTTGGCGAGG AAGGTTATGC 
AGAGGAGTTT AGCATTGAAG CTATTGAAGC TGGAGCTATT GATCCCTCAC 
TAGTACTTGA ACAAATTGAA GCTCACATTG CAACAGTGAA AGAGGAAGCT 
TTTAGCCGGA AGGATATTCT TGAGAAAGTT GAAAGATGGC AAAATGCTTG 
TGAAGAGGAA GCCTGGCTGG AAGATTACAA CAAAGATGAT AATCGTTACA 
ATGCTGGGAG GGGAGCACAT CTAACACTAA AGAGGGCTGA AAAGGCTCGT 
ACTTTGGTCA ACAAGATTCC TGGAATGGTA GATGTTTTGA GAACAAAAAT 
TGCTGCATGG AAAAATGAAC GAGGAAAGGA GGATTTCACA TATGATGGTG 
TTAGCCTTTC GTCAATGCTT GATGAATATA TGTTCGTTCG TCAGGAGAAA 
GAGCAAGAGA AGAAGAGACA AAGGGATCAG AAGAAGCTCC AGGATCAGCT 
CAAAGCGGAG CAGGAAGCTT TGTACGGATC AAAACCCAGT CCATCCAAGC 
CCCTAAGTAC AAAGAAGGCA CCTAGGCACT CTATGGGTGG TGCAAACCGA 
AGGCTATCTC TTGGTGGAGC CACCATGCAA CCCCCGAAGA CTGATATACT 
GCATTCAAAG TCTGTTCGTG CTGCCAAGAA AACTGAAGAA ATCGGCACTT 
TGTCCCCTAG TAGTAGAGGT TTGGACATTG CCGGATTGCC TATCAAGAAG 
TTGTCTTTCA ATGCCAGTAC TCTACGTGAG ACGGAGACAC CTCGTAAACC 
TTTTGCTCAG ATCACACCAG GAAACAGTGT CTGTCGACGC CTGTGCGCCC 
TATCACCAAT AACACTGAGG ATGATGAGAA CAGGACTCCG AAGACATTTA 
CAGCACTGAA TCCCAAGACT CCGATGACTG TTACGGCTCC AATGCAGATG 
GCAATGACTC CCTCTCTGGC CAACAAGGTT TCAGCAACTC CAGTTTCCCT 
TGTTTACGAC AAGCCAGAGG TAACATTGCA GGAGGACATC GACTACTCCT 
TTGAAGAAAG GCGGCTCGCC ATCTATCTGG CCAGGCAAAT GGTTTAACTG 
TTGATCAATT TATGTACGTA GTTGAAATCT GACTGCATTT TCTTGTCGGT 
GGCCATTGCG TATGTTGGTC AACAATAGTC GGCCTTTCCA GTAGCACTAT 
TCTGATTTAC TGCAATTGTT TTAATGTTTT CTACAACCAG TAAAACAGCT 
CTATACATTA GCTTGCTCC

Gene models with high sequence identity

AT5G51600.1 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
E-value: 6e-177; Score: 46.60

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPfam	Microtubule-associated protein, MAP65/ASE1-type	1.7e-88
HMMPanther	Microtubule-associated protein, MAP65/ASE1-type	6.5e-117

See the detailed result >

AT5G51600.1

Model type: Protein coding
Short Description: Microtubule associated protein (MAP65/ASE1) family protein
Curator Summary: Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs.
Computational Description: PLEIADE (PLE); CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-4 (TAIR:AT3G60840.1); Has 4514 Blast hits to 3795 proteins in 427 species: Archae - 120; Bacteria - 292; Metazoa - 2464; Fungi - 290; Plants - 515; Viruses - 1; Other Eukaryotes - 832 (source: NCBI BLink).
Link: InterPro Scan - TAIR