K26934

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K26934

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K26934

Determination of introduced cDNA(s)

  • J033071E07 - Rice Full-length cDNAs - Original: J033071E07

    full reading [+] show sequence

    Nucleotide sequence: J033071E07 - full reading
    GCCTGCTGAA GCGGAACTGA AGAAGAAGAA CCACCGCCGT GGAGACGTAG 
    GCGCAGCGCT CCCGATTCCG CCGCCGCCGT CGCCGTAGCC GTCGCCGCCG
    CTGCCGCGCC GCGGTGTCGA CGAAGGAGCC CTCCGCTTGC GGCCGCTTGG
    GTGGTCGGAT CTAACATCTA GGGGGTGAGC AAATCAACCA GGAGATGGAA
    ACCATCCAGG CGCTAGAATT GGGAGTTGAA CAGAAAAAGT CAGAACCAGA
    GGTTGATGAG ATGCCAGGAT CCATGGAGGA TCAAAAGCCT GCGGAAATAA
    GCCAGGACAA AGTCGCGGAA ACTGATATTA AACCAGCAGT ACAAACTGAG
    CTGGAGACAA GTCCAGTGGC TAATCCAAAC CCTGCAGAAA CAAACCAGTA
    CACAGATGGG GTAACTTATG GTGACCTAGA AACCACTGAT CCAGGCACTA
    CTTACCGCTG CAAAAGATGT CGCACACTCG TCGCTACTGA AGGCTATGTT
    GTTACCCACA AAGTTGGTCG TGGTGAGAAG TGCTTCGCGA CGCGCAAAAA
    GTATCATGTG GATGAGAAGG AACCCGAATG TACCTGCCTC TTTGTGGAGC
    CCTTGAAGTG GATGCAACCT GTGGTGGAAG GATATATTTC AGGGAAGATC
    GCGTGCAGGA AATGCAACAG CCGATTGGGA CAATTCCACT GGGCAGGAAT
    GCAGTGCAGC TGCGGAGCCT GGGTGAATCC AGCTTTCCAG CTGGTCAAGA
    GCAAGATTGA TCAGTGTGAG ATGTGATCAG TCGGGTGACT CAACTTCAAC
    TTCATTATCA GTGACATCGC AATCATACCC AGCTGTAGGA AACATTATTA
    TTTCCTTCTG AAGCTTCTAT AGGCACTCTG GTAGTAAGTT TTGCTGTCTA
    CTAAATGTAA GTCTTTGCAG TCCGCACCAT TCAGATTCAG TGTTTCCTTA
    GTTGCATCAT CTTGATGAAA ATAATGGGAA CATATCAGG

    Gene models with high sequence identity

    1. AT4G18593.1 [+] show detail - dual specificity protein phosphatase-related
      E-value: 6e-34; Score: 141.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther gb def: Hypothetical protein 6.8e-19
    HMMPanther DUAL SPECIFICITY PROTEIN PHOSPHATASE 6.8e-19

    See the detailed result >

    AT4G18593.1

    Model type
    Protein coding
    Short Description
    dual specificity protein phosphatase-related
    Computational Description
    dual specificity protein phosphatase-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR