K27106

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27106

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27106

Determination of introduced cDNA(s)

  • J023138J08 - Rice Full-length cDNAs - Original: J023138J08

    full reading [+] show sequence

    Nucleotide sequence: J023138J08 - full reading 
    GATTCCTACC TCAATGATTG GATTGAGATA TTTATTTATG ATGATCACAT 
    CTGCACCTGT TTCCTTCAAG GGGATATTAA AGCTGCTGCC TTTTCTTGGA 
    CACTGAAGGA GGAGTATGAT CAGGCTTTGG GTGGTGGCCA CATGGCTGAT 
    TGTCTGCGCG GCGGCGCACC CCGGTGAGCA GCCGCTGTCG AGGATCGCTG 
    TCGAGAGGAC GGTCCTTGCC GTCAACGAAT CGGCGCATGT CAAGGCATCG 
    CCTTGGGTTC TTGGACTGAA GGGTCAGAAC AGTGAATGGG TAGAGGTAGA 
    GTTCTTCCAT CCAAGCCCCT CCAATGACGA CTGGATTGGA GTGTTTTCTC 
    CAGCTAATTT TAGTGCTGCA ATCTGTGAGC CTGAAAACAA GAGGCAGCGT 
    CCCCCGGTGC TATGCACGGC ACCTATCAAG TACCAATTTG CAAACTTCAA 
    TAATGATGGC TATAATAAGT CTGGGAAGGG CTACCTGAAG CTTCAGTTGA 
    TCAACCAGAG GGAAGATTTC TCATTTGCAC TCTTTTCAGG TGGCCTATTG 
    AAGCCGAAGC TAATTGCAGT CTCAAACAAG GTCGCATTTG CAAATCCAAA 
    GGCGCCTGTT TACCCACGTT TGGCACAAGG GAAGTCTTGG AATGAAATGA 
    CAGTCACCTG GACAAGTGGA TACGATATTA AAGAAGCTGT TCCTTTTGTC 
    GAATGGGGTG CGAAAGGAGG CCGTAGTTTT CTTTCTCCAG CTGGAACATT 
    GACATTCGAC AGGAATAGCA TGTGTGGTGC ACCGGCACGA ACTGTTGGAT 
    GGCGCCATCC TGGTTACATT CATACAAGTT ACTTAAAAGA TCTGTGGCCA 
    GATTCACTGT ATACCTACAG ACTAGGTCAT AGGCTACCAA ACAGTACACT 
    TATCTGGAGC AAGTCATACA GCTTCAAAGC ATCACCTTAT CCTGGACAAG 
    ATTCTTTGCA GCGAGTAGTC ATATTCGGAG ACATGGGAAA GGCAGAGGCA 
    GATGGTTCAA ATGAGTTCAA TGACTTCCAG CCAGGTTCAC TGAACACTAC 
    TTACCAGATC ATCAGAGACC TGGAAAACAT TGACATGGTT GTCCACATTG 
    GGGATATTTG CTACGCAAAT GGTTACTTGT CGCAGTGGGA TCAGTTCACT 
    GCACAGATCG AACCGATTGC TTCGACTGTG CCATACATGA TTGGCAGTGG 
    TAATCATGAG AGGGATTGGC CTGGAACTGG TTCTTTCTAC GGAAACCTTG 
    ATTCCGGAGG AGAATGTGGT GTTCCTGCTC AAACTGTATT CTACACTCCT 
    GCCGAGAACC GTGCGAAATT CTGGTATGCG ACAGACTACG GCATGTTCAG 
    GTTCTGCATT GCCCATACAG AAGAGGACTG GAGGCCAGGG ACCGAGCAGT 
    ACAAGTTCAT CGAGCAATGC CTATCATCTG TCGACAGGCA GAAGCAGCCA 
    TGGCTCATAT TCCTTGCTCA CCGCGTTCTT GGGTACTCAT CCTGCTCCTA 
    CTATGAAGAA CAGGGTACAT TTGGGGAGCC GATGGGGCGA GACACAATAG 
    AGGAGCTATT ACAAAAGTAC AGAGTTGATC TTGCCTTCTA TGGTCATGTT 
    CACAGCTATG AAAGAACATG TCCAGTTTAT CAGGGTCAGT GTGTCGTTAA 
    CGCTTCGGAT CACTACAACG GCCCATTCAA AGCGACGACG CATGTGGTCG 
    TTGGAGGTGG TGGTGCCAGC CTTTCAGAAT TCACCACTTC AAAGATCAAA 
    TGGAGTCACT ACACAGACTT TGACTTCGGC TTCGTGAAGC TCACGGCTTT 
    CAATCATTCA TCCATGCTAT TCGAGTACAA GAAGAGCCGC GACGGCAATG 
    TGTATGATCA TTTCACAATC TCACGCGATT ACCGGGACAT CCTGGCCTGC 
    TCAGTTGACA ATTGTCCTCG GACCACACTG GCTACCTAAG GCATGAACGG 
    CTCTAGATGG GTGAGAATTG AGATTGGTTT GATGTGGCCT CTTAGAGAAC 
    TGTAGTTGCT GCACATTAGT TCTTTTTGGG ACTGTACCAA TAAATCTAAT 
    AAGCACAGAA TTTTCTTGGC TGTGTATTTT GTTTTGTTGT AGCAGTAGAT 
    GAAATTCTGA ATGGTTTTTG CTCTAACCTG GACACCTGAT GATGAATAGG 
    TTCAGAATGT CAGCCAGTTG CAGTGATTTA CAAAAGTTCA GGGCTTGGCT 
    GAGTAAAACT GAGATAAGGA AACGAGTGAA ATTAAGC

    Gene models with high sequence identity

    1. AT1G13750.1 [+] show detail - Purple acid phosphatases superfamily protein
      E-value: 0; Score: 875.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PTHR22953 2.1999990098093e-102
    superfamily SSF56300 4.2e-67
    superfamily Purple acid phosphatase-like, N-terminal 9e-23
    Gene3D G3DSA:3.60.21.10 2.19999900980727e-83
    HMMPfam Metallophosphoesterase 1e-16

    See the detailed result >

    AT1G13750.1

    Model type
    Protein coding
    Short Description
    Purple acid phosphatases superfamily protein
    Computational Description
    Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 27 (TAIR:AT5G50400.1); Has 1802 Blast hits to 1786 proteins in 349 species: Archae - 1; Bacteria - 481; Metazoa - 191; Fungi - 77; Plants - 759; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR