K27304

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27304

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27304

Determination of introduced cDNA(s)

  • J013147K07 - Rice Full-length cDNAs - Original: J013147K07

    full reading [+] show sequence

    Nucleotide sequence: J013147K07 - full reading 
    TGAGCGATTT GTTTAGATCA AACGGGTTCG TAAAAAAAAA GTTTTATTCT 
    CGGGTTCGTT GGGTTTTATC TATATAGGCG GCGAGCGAGA CCATCTCATT 
    CAGTTTTATT CCGCGCGCCT CCTAAATCGC GCTTAATCCG GCGCATCCTG 
    ATTCAGAGAG TGGTTTGGAT TCGTTGGATT CGAGGTGAAC GAACAGGGCG 
    TGGAATTTTC GAGGACTCTC TCCTCTCGCA GAATCCCGCG CGCCTCCTGA 
    TTCGGAGAGC GGTTTGGATT TGGATTCGAG GCGAGGAATT TTCGAGGACT 
    TTGGCAGCGG CGGCGGGGGC TGGTGAGCTT CTGCTGCGGC TTGGAGTCTG 
    CCCCCACCAT TGCGTGGGGA GGTGGAGGTG GAGGCGGTGG TGGCGGCGGG 
    GGCGGCGGAG GACGATCCTT CCGCGGCTTC GGTGGCAGGT TTGATCCAAA 
    TTGAGCGCCC TGAGGATTTG GGGCGTGTTT ATGGAGGATT AGATCGAGAA 
    TTTTGGTTGT TTCTGTGAGA TGGCCGCCGA TTCCAGCATG GGATTCCATC 
    AGGGGATCAC GGCCTCGATG TACAACCATC ACATGCTCTC CTTCCAATCT 
    AACAGCGACT TGGGCGGTGG CGCCGGCGCT GCGGCCGGTA TGGTGATGGC 
    CCCGAGGAGC ATGAACGGGA CTAGTAGCAG CGCTGGGCTG TTCGTCTCTC 
    CGAACACCGG TGTGCTGGGC AACGCATCGG TGGCCGGCCC GTCGAGGAGC 
    TCGTCGGGGG ATGCGTTCAG TAGCACGGTG GCGCCCAAGT ACAAGTTCGT 
    CACTGGTTCG CCTTCAGATT GGAATGACCG TGAGCTGAAC ACACTGAAGG 
    AAGGGCTTGT GAGATATGCT CGCGAACCGA ATATCATGAA GTACATAAAA 
    ATAGCAGCTA TGCTACCCAA CAGGACTGTC AGGGATGTTG CATTGCGGTG 
    TTGGTGGGCT ACAAGTAAAG ATAGAAGGAA GAAACCTGAT GGATTTTATA 
    CAGGGAAAAA GATAAGAGAC ATGAAGCCAA TCCAGGACAA GATGGTTGCA 
    TCTGCCTCCA TGGCTAATTT TCACCTGGCA CCTGCAAACA CTGTGACCCC 
    TTTCTCAATA TCGATGCAAC ATACAAATCA GCAATGTCAG GTTCCTAAGG 
    AAGAAGTTCC TGTCGTGGAT AGTGCAACAC AGCATCTCCT GGAAGAAAAC 
    AATCATTTAC TCAACCAAAT CGCCACAAAT ATCGAAACAT TCAAGACGGG 
    AGAGAACACG GATCTCTTTT TTCGGACAAA CAACAACTTC AAAAATATTT 
    TAAGCAGAAT GAGCGAGACG CCTGGTATCA TGGGCCAGAT GCCCCAATTG 
    CCAGTGCAAG TAAACGAAGA CCATCTGAGT TCACTTCTTC AGCTGGACAG 
    AATGGTTCCT TCGTATGGCG TAACGCAAAC CTCTCATATG AAGCAAGAAC 
    CGCGAAGCTA GTATAAACAT ACACGAAAAC AAGGACTTGA AAAGGAAAAA 
    AAAGAGCAGA TGGCTGGAGC TCCGCCGCCC AAGTTTCGTG TACCATGAAG 
    AAGGCTAAGT TGCCGCACCG AGTGAGCGAG CGCCAGGAAC AGTCCCGGCG 
    TTTCTTTCTT CCAGCGAGAT TGTTTTCCAG TGATCTGATT GTCTGCCCGC 
    CTGCCTACCT GCCCGAGTTG AAAGCTGTTG AAAGCACCGG AAATTGAGGC 
    CTGCAGCTGC TTGCGGGGGT ATGCGCAACG GGCGAGCGAG TTGCTGTTGT 
    TGTACCTGGT TGGGTATCCA GCGAAATGAA TACACCAGAC ACTTGATTCG 
    GGAGTGAGTA ACACGCACAC AAGTGACTGT AAATATTTGG ATGGCTGGAG 
    GTGTTCCCCT GTCCTGTTTT GTTCTCTCTG ATTGGTCGTC AATATATTTT 
    TCGGAAGGGT ACCTTGTATG TTTTTCCACT TTGGAGAGTT AGGAGGGCAC 
    CTTATGTATT ATTGCATAGT TGGAAGATCG TGTTGATAAA ACCAACAAAA 
    AGATGGCTTT AGGTTTTG

    Gene models with high sequence identity

    1. AT1G10820.2 [+] show detail - Protein of unknown function (DUF3755)
      E-value: 4e-30; Score: 130.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G10820.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3755)
    Computational Description
    Protein of unknown function (DUF3755); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G60670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR