K27537

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27537

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27537

Determination of introduced cDNA(s)

  • J013057A08 - Rice Full-length cDNAs - Original: J013057A08

    full reading [+] show sequence

    Nucleotide sequence: J013057A08 - full reading 
    GTCCGTCGTC TTCCTTGTTC CTGGTAGGAT TCTTGCTATA GTTCTTGCGG 
    CGGATTTGGT TGCTGGAGCC CTTCGTGGAG GAGCTCTGGG AGCAGAGGGG 
    GGAGGGGGAG GGGCGAGCGC TGGCTTCGCT CGCCGCCGCG CTCGGAGCGG 
    CACTCGTGCT GCTCCGGCTC AGCCGCGAGG GGAGCCGAAC ATGAGATTGT 
    ACCAGCAATT CCTAGAATTG GTGAAGACGA GCCGCCTCCT TCCTGGGACT 
    TTGTTTTGAC TCCGAAAGCT ATGGTTGGAA GAGGTTCACC AAAACTCAGT 
    ATGATTCCAA AGGGATCTCC TAAGTTTGGT AGGATGCTAT CTGCAGCAAG 
    TACTAGGATG AAGACAGTCT CTCCTCAAAG CATACTTGCT AAGAAGACTG 
    CAAGCTCTCC AAAAGGCAAC CAAGTCAAGC AGAGAGCAAT TTGGAACGCG 
    GAGTTGGAGA AGTCACTTGT TGAAATCCTT TTCGAGTACA AAGTCAATGG 
    TTGTAGAGGA GATAATGGCT GGACCACTAA AGGTTGGAAT AGAATGGTGA 
    AGGAATTCCA CGCAGGGAAC AAATGCGTAT CATTCACCAA AAATCAAGTT 
    CAAGAGGAGG GTCAACTGAA AAGAGATTAC AAGATGTTGA AAGCGGTCAG 
    ACAACAAAGC GGGTCTTCTT GGAACGAGAA GAGATGCATG GTCGAGGGAT 
    CGCCAGCTAT GTGGCAAAAC TTGCAAATTA TAAGTGGATT TGTGATCAAT 
    ATCTTCCTTT GCATGTGATT TGTGATTTCT TTGATGCCTT ACAATGATTT 
    GTGGTTATGC TTTTGCATGT GTAGACATTC CCAAAGATCA AAAAGTTTCG 
    CAACAACAAG GCCAGCTTTC CCTTGTATGA TGCACTTGGT GAGCTATATG 
    ACGGCCATCT TGCTGAGGGA AAACACAACT GCACCTCCTT TGATTCAATG 
    GAAGATGAGA AACCCCTGAG GCTAGTACAG GAATTGGAAG ATGATAGTCA 
    AGAGCAAGAT GATGTTGTGC TGCTCGAAGA CCAAAGAAAC TCAAGAGAGG 
    AAGAAACTGA TGTTGTGCTG CTTGGAGACC AAAGAAACCC GAGAGACAAA 
    GAAACTCAAG CTGAGGATTC AAGAATTGTT ACTGAAGAGC AAAGAAGACA 
    GGCTTTAATA GCAAAGAGGA GACAAAAAAA GAAGATAACA AGACTAGTAA 
    GAATTCAAGA GTGGAGAGCA TGATGGAGCG ATACCTTGAG ATGAGGAGTA 
    AACAAGCCGA GGAAGAAGTT GCAGCTAGAG AGAAGGTATG TTCACAAGCA 
    ACAGATTATT TTGTCAAGTG TGTATTTATT GAGCTCAATG GATGTTACCA 
    AACAAGAGAA GGCAAAGGAT TATGCAGTTC TTAAGACCCC AGCAAATAGA 
    GAAGTCTTTA TGTGTGCTTG CGAAGATGAC TTAGAGTCTG CTTTAATTTA 
    GCTGAGAAGT GAAATGGCCT AGCATCACCA AAGTTGACAC ATTTGATGAA 
    GGAAAACAAT GGAAGTACAT GGTCCAAGGT CGCCAGGGTG ACAGAATGGA 
    TCCAAGGTCA ATACTCAAAG CTACTAGACT GCCATAGGAG AAGGACATGG 
    TCTGAGTACA AGAGGATTTA TTTGCTGCTC TGACAATATA GAATATTTAT 
    GTTTTCAAAC TGGTTACAAA ATTATGCTTT GGACTTATGC ACTTTGGGTG 
    TAATTGTAAT TTATTTTTTG GATCTAGTGA CCATTTTCAT GTTTAAACAT 
    GATATTAGCA CTTTGGGTCT G

    Gene models with high sequence identity

    1. AT2G24960.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); ...
      E-value: 0.0000003; Score: 53.90

     

    InterPro Scan Digest

    See the detailed result >

    AT2G24960.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR