K27609

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27609

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27609

Determination of introduced cDNA(s)

  • J013048M24 - Rice Full-length cDNAs - Original: J013048M24

    full reading [+] show sequence

    Nucleotide sequence: J013048M24 - full reading
    GTATATCATG TGACATGTGT GACAGTCTGA GAGCTTTCGT CCTCCTCCAT 
    TCCACACCAA GCCGGCCATG GCTAAGGTAG CTCTCAGCTC CCTCCTCGCC
    GTCGGTGGCG CCGCCGCCTT CGCCGTTCAG CCGTCGAAGA AAACCGGCTC
    CGGTTTGTTT CGCAATCGCG TCATCACCGT CAGGCGGCCC AGGATTTCAG
    CCAATCTCGG TGGAGATGGG GAGGTGAAGC CTGCAGGTAA CAAGAAGAAG
    TTCATCACCA GAGAAGAGGA GCCAGAGCAG TATTGGCAGG CGGCAGGGGA
    GAGGAAGGGC GAGAACCCGA TGAAGACGCC GCTGCCCTAC ATCATCATCT
    TTGGCATGTC GACGCCCTTC GTCATCCTCG CCATCGCCTT CGCTAATGGC
    TGGATCAAGG TCCCCGTCCG GTGAACCTCC TCCCGTCCAT GTCGCATCAT
    CATCAGTTCA TCACATCAGC AAATCTTGGA AGGTTGCTAC TTGCTGCCAA
    GAAACTCCTC ACTGCGACCA CTGCACTCCT ACCGGGAGCC CTGAAGAGTA
    AAATTTCATA GAGATCTTGA GCATACCAGT ACGTAATGTA TGTGATAAAC
    AAGTACCTTT TTTCCCAGTA CTGTAAATCT GTAAGTAATT ACAGTTCATA
    TTAACATCCT TCCTGCTTCT GATCCAAGGA GGTTTTGTCA TGTACAAGAG
    GAGGTTTTTA TGGCATCAGC TTTGTC

    Gene models with high sequence identity

    1. AT4G13500.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-31; Score: 132.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G13500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR