K27632

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27632

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27632

Determination of introduced cDNA(s)

  • J033026B21 - Rice Full-length cDNAs - Original: J033026B21

    full reading [+] show sequence

    Nucleotide sequence: J033026B21 - full reading
    AAAAAAAAAG CCCAAGGGCC CGAATTGGCA GCCCAACGAC GGCGACGGCG 
    GCGGCGACGA CGACGGCGAT GGCGGCGGCG GCGGTAACGG TCAAGCTCGG
    AGGGTGGAGT AGTTACTGTT ACTGCCCTAC CACCACGAGG AGGAGCAAAC
    CGGCGGCGGT GAAGATGATG ATGGCGCTTT GCCCTACCAG CTTCCGGATC
    GAATTGCCTC GACGAACCAT TCGGGCTGCC ATACTGAACA AGAGACACAC
    CGTTCCTTGC TACCAGAGGC AAGAAGGAGC TTCATCTCCA GCTCCGCAGA
    TCGAAGCCAA GTCAATGGAG GAGGTATATG ATGCTTTGGC TGAGCACCTT
    TTTTCTGTTT TGAAGAACAT TGAACATCTT GACTCAAAAT ACATTGTTGG
    TATAGCTGGA CCACCTGGCG CGGGAAAGTC TACAGTTGCT TCCGAAGTTG
    TTCAACGTGT TAATAAACGC TGGTCCCAGA AGCACGAGAA TGGTAGTTCA
    CTTATTTCAA CCGAAGAAAT TGCCACGATG CTTCCCATGG ATGGTTTCCA
    CCTTTATCGG TCCCAACTAG ATGCAATGGA GGATCCAAAA GAAGCACATG
    CAAGAAGAGG AGCACCATGG ACATTCGATC CATCCCGGTT TTTGAAATGC
    CTACAGACCC TGAGAGAAGA GGGTTCAGTT TATGCTCCAT CATTTGATCA
    TGGTGTTGGT GATCCAGTTG AAAATGACAT ATTCGTAAAG CCGCAGTGAG
    TTATCATTGC AGATCCAGAA TATATTCTCT TTGTAGATTG CAGAATGCTT
    GAACTCTAGT TTCTTATTTC GATTTAAATC AAATGTGAAG CATGCCTGAG
    TTATTCATAT AGTTAGTTCA GATGCTGAAC ACACTGGCCT TTATAGAACC
    TTTTAGACCA ACTCACTTTT AGCATTACCT AACACTGGAA CCTTATGCTG
    TTATTATGCT GTGTGGAATG ATCATATTCT ATCAGGCACT GCCAAGTTCT
    AATTAATCTT TTTTTAATGA ATACCTGTGT TTGGAACTTT GTATGCCTGT
    ATGCGGTATG TGAATAGCCG CAAGCAGATA CCTTTATGAG AAGTTTTGTT
    TTATGCTTTA TCTTTCTAAC AGATTATGGC TCTCGCACCA AAAATGGTTT
    ATTTTAAACA AGCCAGGTAA TTTACCCTAA GTATGTTCAG CACATGCTGG
    TTACTAATTA CTATGATTTT GGCAGACACA AAATAGTGAT TGTCGAAGGC
    AATTATCTAT TACTGGAAGA AGATGCCTGG AGGGACATTA GAGCCTTGTT
    TGATGAAAAA TGGTTTATCG ATATTGACAT TGATGTCTCC ATGCAAAGAG
    TGCTCCAGAG ACATGTCGCC ACAGGAAAAG AGCCAGATGT AGCAGCATGG
    CGGATCTCGT ATAATGACCG GCCAAACGCA GAGCTTATCA TGAAGTCAAA
    AAAGTCTGCA GATCTTGTAA TCAGATCGGT GGATTTGTCA AGATAAGAGT
    CCATGTCTTC AATTGCTGAT TAGATATCTG CTCTAATAAT GTTCAGAGAA
    AGACACTACC AATGGTTGTT TCCATGGAGA TCTTTGTACA TATAATAAGC
    TCAATGCATC TCTCCATGGT GATTTTTTTA GATCAAATAA ACTTATCCCC
    AACCAGTTTG GTTGTACAGT CGATGATGAA TAACTTATTC AAC

    Gene models with high sequence identity

    1. AT1G03030.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
      E-value: 9e-53; Score: 205.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Phosphoribulokinase/uridine kinase 0.000064
    HMMPfam Phosphoribulokinase/uridine kinase 0.000022
    Gene3D no description 1.4e-22
    Gene3D no description 0.0000000000013
    superfamily P-loop containing nucleoside triphosphate hyd 0.000000000000001
    superfamily P-loop containing nucleoside triphosphate hyd 0.00000000002

    See the detailed result >

    AT1G03030.1

    Model type
    Protein coding
    Short Description
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Computational Description
    P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR