K27632

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27632

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27632

Determination of introduced cDNA(s)

J033026B21 - Rice Full-length cDNAs - Original: J033026B21

full reading [+] show sequence

AAAAAAAAAG CCCAAGGGCC CGAATTGGCA GCCCAACGAC GGCGACGGCG 
GCGGCGACGA CGACGGCGAT GGCGGCGGCG GCGGTAACGG TCAAGCTCGG 
AGGGTGGAGT AGTTACTGTT ACTGCCCTAC CACCACGAGG AGGAGCAAAC 
CGGCGGCGGT GAAGATGATG ATGGCGCTTT GCCCTACCAG CTTCCGGATC 
GAATTGCCTC GACGAACCAT TCGGGCTGCC ATACTGAACA AGAGACACAC 
CGTTCCTTGC TACCAGAGGC AAGAAGGAGC TTCATCTCCA GCTCCGCAGA 
TCGAAGCCAA GTCAATGGAG GAGGTATATG ATGCTTTGGC TGAGCACCTT 
TTTTCTGTTT TGAAGAACAT TGAACATCTT GACTCAAAAT ACATTGTTGG 
TATAGCTGGA CCACCTGGCG CGGGAAAGTC TACAGTTGCT TCCGAAGTTG 
TTCAACGTGT TAATAAACGC TGGTCCCAGA AGCACGAGAA TGGTAGTTCA 
CTTATTTCAA CCGAAGAAAT TGCCACGATG CTTCCCATGG ATGGTTTCCA 
CCTTTATCGG TCCCAACTAG ATGCAATGGA GGATCCAAAA GAAGCACATG 
CAAGAAGAGG AGCACCATGG ACATTCGATC CATCCCGGTT TTTGAAATGC 
CTACAGACCC TGAGAGAAGA GGGTTCAGTT TATGCTCCAT CATTTGATCA 
TGGTGTTGGT GATCCAGTTG AAAATGACAT ATTCGTAAAG CCGCAGTGAG 
TTATCATTGC AGATCCAGAA TATATTCTCT TTGTAGATTG CAGAATGCTT 
GAACTCTAGT TTCTTATTTC GATTTAAATC AAATGTGAAG CATGCCTGAG 
TTATTCATAT AGTTAGTTCA GATGCTGAAC ACACTGGCCT TTATAGAACC 
TTTTAGACCA ACTCACTTTT AGCATTACCT AACACTGGAA CCTTATGCTG 
TTATTATGCT GTGTGGAATG ATCATATTCT ATCAGGCACT GCCAAGTTCT 
AATTAATCTT TTTTTAATGA ATACCTGTGT TTGGAACTTT GTATGCCTGT 
ATGCGGTATG TGAATAGCCG CAAGCAGATA CCTTTATGAG AAGTTTTGTT 
TTATGCTTTA TCTTTCTAAC AGATTATGGC TCTCGCACCA AAAATGGTTT 
ATTTTAAACA AGCCAGGTAA TTTACCCTAA GTATGTTCAG CACATGCTGG 
TTACTAATTA CTATGATTTT GGCAGACACA AAATAGTGAT TGTCGAAGGC 
AATTATCTAT TACTGGAAGA AGATGCCTGG AGGGACATTA GAGCCTTGTT 
TGATGAAAAA TGGTTTATCG ATATTGACAT TGATGTCTCC ATGCAAAGAG 
TGCTCCAGAG ACATGTCGCC ACAGGAAAAG AGCCAGATGT AGCAGCATGG 
CGGATCTCGT ATAATGACCG GCCAAACGCA GAGCTTATCA TGAAGTCAAA 
AAAGTCTGCA GATCTTGTAA TCAGATCGGT GGATTTGTCA AGATAAGAGT 
CCATGTCTTC AATTGCTGAT TAGATATCTG CTCTAATAAT GTTCAGAGAA 
AGACACTACC AATGGTTGTT TCCATGGAGA TCTTTGTACA TATAATAAGC 
TCAATGCATC TCTCCATGGT GATTTTTTTA GATCAAATAA ACTTATCCCC 
AACCAGTTTG GTTGTACAGT CGATGATGAA TAACTTATTC AAC

Gene models with high sequence identity

AT1G03030.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 9e-53; Score: 205.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Phosphoribulokinase/uridine kinase	6.4e-05
HMMPfam	Phosphoribulokinase/uridine kinase	2.2e-05
Gene3D	no description	1.4e-22
Gene3D	no description	1.3e-12
superfamily	P-loop containing nucleoside triphosphate hyd	1e-15
superfamily	P-loop containing nucleoside triphosphate hyd	2e-11

See the detailed result >

AT1G03030.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).
Link: InterPro Scan - TAIR