K27734

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27734

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27734

Determination of introduced cDNA(s)

  • J023145F09 - Rice Full-length cDNAs - Original: J023145F09

    full reading [+] show sequence

    Nucleotide sequence: J023145F09 - full reading 
    GATACCCATT AACAGCAATC ACCAATAAGT AATGGAACTA CAATCATCAT 
    GGGCTACTTT CTTTGCCGTC GTGCTTGCCA CCGTCGTCTT CCTCCTCCGG 
    GCCGTTCTGC TCCGCCGCCG CCGAGCTTAC AAGCTGCCAC CAGGACCAAA 
    GCCATGGCCG ATCATCGGCA ACCTGAACCT CATCAGCTCG CTGCCGCACC 
    GCTCCATCCA CGAGATATCC AAGCGCCATG GCCCCATCGT GCAGCTCTGG 
    TTCGGCTCCT GCCCCGTCGT CGTCGGCTCC TCCGTCGAGA TGGCCAAGCT 
    CTTCCTCCAG ACCAACGACG CGGTGTTCGC CGACCGCCCC AGGACCGCCG 
    CCGGCAAGTA CACCGCCTAC GACTGCACCG ACATCACCTG GTCGCCCTAC 
    GGCGCCTACT GGCGCCAGGC GCGCAAGATG TGCGCCGCCG AGCTCTTCAG 
    CGCCAGGCGG CTCGAGTCGC TCGAGCACAT CCGCCACGAG GAGGTGCGCG 
    CGCTGCTGCG CGAGCTGCAC GGCTCCGGCG CGGCGGGGAA CGCCGTGCAG 
    CTCAGAGACC ACCTGTCAAT GGCGGCGCTC GGCGTGATCT CGCGCATGGT 
    GCTCGGAAAG AAGTACGTCG AGAAGCAGCC GGCAGGAGGC GGAGCGGCGA 
    TGACGACGCC GGAGGAGTTC AAGTGGATGC TGGAGGAGCT GTTCCTGATG 
    AACGGCGTGC TCAACATCGG CGACTTCATC CCATGGCTGG ATTGGCTGGA 
    CCTGCAGGGG TACATCAGGA GGATGAAGAA TGTGAACAGG TTGATACACC 
    GGTTCCTGGA CCGTGTCCTC GACGAGCACG ACGAGCGACG GCGGCTACAG 
    GGGGATGGCT TTGTGGCCAG GGACATGGTG GACATTCTCT TGCAGCTCGC 
    CGATGACCCT AACCTCGACG TTCAGCTTAC CAGGAATGGT ATCAAGGGTA 
    TTACCCAGGA CCTTGTCACT GGTGGTGCGG ACACCAGTAC GGTGACCGTG 
    GAATGGGCCA TGTCGGAGGT CCTGAAGAAT CCGGCGATCC TCGCCAAGGC 
    CACCGAGGAG CTAGACACCA TCGTCGGCGT CGGCCGCTTG GTGACGGAGG 
    GTGACATACC ACACCTCCCC TACATCCACG CCATCATGAA GGAGACGATG 
    CGTATGCACC CGGTGGTGCC GCTGCTGGTA CCCCGGATGT CCCGTGAGGA 
    TGCCTCCGTC GCCGGCTACG ACGTCCCCGC TGGCACGCGC GTGCTCGTCA 
    ACACGTGGAC CATCGGCCGC GACCCGTCGG TGTGGGACTC GCCTGAGCAG 
    TTCCGGCCGG AGCGGTTCGT GGGGAGCGGT ATCGACGTCA AGGGGCGCGA 
    CTTCGAGCTG TTGCCGTTCA GCTCAGGCCG GAGGATGTGC CCCGGGTACA 
    ACCTCGGTCT CAAGGTCATC CAGCTCACCC TCGCCAACCT GCTGCACGCC 
    TTCTCCTGGT GCCTCCCCGA CGGCGTCACC GCCGGCGAGC TGAGCATGGA 
    GGAGATCTTC GGGCTCACCA TGCCACGGAA GATCCCTCTC CTCGCCGTCG 
    TCAAGCCCAG GCTGCCAGAC CATCTCTATG CCGAGCCTTA ATGACGCGCC 
    ATGCGTTGCA TGCATGGATG TACGTCTGTT GGTGTCTAGT TTGATCGAGG 
    TCATTGCGTC TTCTGCATTA ATTCCTGGAA GCTATAGGCT CCATTTCAAG 
    GATATATATA ACTCCCTAGT GCATAGTTGC GATGATTTAC GAATAATAGC 
    ACTAGAATGG TTTCGTATTG TAGTACTGCA AGATGCAAGC TTAAAATGTT 
    GTCACCAGCG CTATGGATGT ATGATAGTAT GTCCTATGTT GGGACGGACA 
    TATCCAGTCC CTCCACCCTG CTAAATAAAA GGGATTCTAT GTTTGCC

    Gene models with high sequence identity

    1. AT5G07990.1 [+] show detail - Cytochrome P450 superfamily protein
      E-value: 1e-109; Score: 394.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Cytochrome P450 1.1e-130
    Gene3D Cytochrome P450 2.4e-126
    HMMPfam Cytochrome P450 1.3e-92
    HMMPanther FLAVONOID 3-HYDROXYLASE 5.1e-217
    HMMPanther Cytochrome P450 5.1e-217
    PatternScan Cytochrome P450, conserved site 0
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, E-class, group I 1.1e-44
    FPrintScan Cytochrome P450, C-terminal 4.9e-09
    FPrintScan Cytochrome P450, C-terminal 4.9e-09
    FPrintScan Cytochrome P450, C-terminal 4.9e-09

    See the detailed result >

    AT5G07990.1

    Model type
    Protein coding
    Short Description
    Cytochrome P450 superfamily protein
    Curator Summary
    Required for flavonoid 3' hydroxylase activity.
    Computational Description
    TRANSPARENT TESTA 7 (TT7); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 35179 Blast hits to 34934 proteins in 1774 species: Archae - 51; Bacteria - 4733; Metazoa - 12156; Fungi - 7299; Plants - 9637; Viruses - 3; Other Eukaryotes - 1300 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR