K27751

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27751

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)
flower (PO:0009046)
  • abnormal (PATO:0000460)
    (Flower::Others)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27751

Determination of introduced cDNA(s)

  • J013043F18 - Rice Full-length cDNAs - Original: J013043F18

    full reading [+] show sequence

    Nucleotide sequence: J013043F18 - full reading 
    GGCCTAGAAC TTGCATCCCT GAACTGTTCT ACAATATAGA TCTCATGGAT 
    GAGATGGCTG CACGAACATG GTTGTGGTTG CTACTGTCCC CTCTCATCCT 
    CCTACTGCTG CACTATGCTC TGGCCCTGCT AACTGCACGC CGAGCGAGGA 
    AGAACCCCTT GCCACCTTCA CCTCCAGCCT TGCCATTCAT CGGGCACCTC 
    CACCTCATCG GCGCCCTCCC TCACGTCTCC CTCTGCTGCC TCGCCACGAA 
    GCATGCGCCC GACCTCATGT TCCTCCGACT TGGCACGTCG TTGCCGGTGC 
    TCGTCGCTTC CTCGCCCTGT GCCGCCGAGG CCATCCTGCG CACGCATGAC 
    GACGTGTTCG CGTCGCGGCC ACGCACCGTT CTAGCGGATA TCATCTTCTA 
    CGGCTCGCGC GACATTGGCT TCGCACCGTA TGGCGAGGAT TGGCGGCAGG 
    CAAGGAAGCT TGTGAACACG CACCTGCTGA GTGTCAACAA GGTGCAGTCG 
    CTATGGCTTG CCCGTGAGGA GGAGGTGAAA ATTGTGATGG AGAAGATAAG 
    CAAAGCGGCA TTCGCACGTG AAGCAGTGGA TATAGGCCAG ATTCTTTGCT 
    CATTCACAAA CGATCTCGCA TGCCGTGTTG TGTCAAGGAA GTTAGTCGGG 
    GATGACAGGC AGAAAAAGCT CCTCCAAGAG TTGGTTAATA AGACAATAAA 
    GCTGCTTTCT ATCTTCAACG TGGAGGAGTA CTTTTCAATT TTAGCTCGGA 
    TTGGCGTGAT TGGGAAGGTG ATGTGCGCAA GAGCTGAGAG GTTGAAAAAG 
    AAGTGGGACA TGCTGCTGAA AAAGCTGATC GCCGACCATG AGAGCAAGTG 
    CGATTCATAC TTAGTATGTG GCCGTAACAA AGATGACTTT GTGGACATTT 
    TACTGTCTGT TAGGAAGGAG TATGGTCTCA CCGAAGAACA TGTCAAAGCT 
    ATTCTTGAGG ACGTCTTTAT TGCGGGAACA CAGTCGTCTG CTCGGGTGAT 
    CGAATTCACC TTTGCTGAGC TCATGCGGAA GCCACACATG CTCAAGAAGG 
    TGCAGGATGA GGTGAGGGCT TGCATTCCCA ATGGACAAGC AATTGTTAGT 
    GAAGTTCAAG TTAACAACAT GACTTACCTG AGAGCAGTTG TGAAGGAGGT 
    ACTAAGGCTG CACCCTGTGG CACCACTCCT TGCGACACAC GTCTCCATGG 
    CTGACTGCAA CATCAATGGG TATATGATCC CTTCAGGGAT GCGTGTCTTG 
    GTCAACGCCT GGGCCATTGG TAGGGACGAA CGCTTCTGGT ATGATCCAGA 
    GAAGTTCATG CCAGAAAGGT TTGTTGAAAG TGTGAATGGT TCTGCCACTG 
    CGTCAGTCAA CTTTTGGGTG AATAACTATC AATACTTGCC ATTTGGTTCT 
    GGAAGGAGAA TGTGCCTCGG GATGAACTTT GCCATGGCAG TTATCGAGAT 
    CACACTAGCG AACCTTCTCT GGAAATTTGA TTGGGCGCTG CCTGCACATG 
    CAATGGAGGT TGATATGTCA GAAGAGTTTG GGTTGTCGGT GCGTCTGAAA 
    GAAAAGCTAT TGTTGGTTCC AAAGCAACAT GTGTAGCTGC TAGCAAGTAC 
    TCGAAGGAAT TGAATTGTCC AACTTTAATG TGAGAAAGTC TACCATGACC 
    TATGGGGGTC TACACTAATG TTAACCTCTG GACAAAGTCA TTATACACCG 
    TTTCTCTATG CTTCAACCCT TGGAGGATCC AATTCTTATC ACAAAATATG 
    TGTGTAACAA GTAATAATTT TTGCATGGT

    Gene models with high sequence identity

    1. AT3G48310.1 [+] show detail - cytochrome P450, family 71, subfamily A, polypeptide 22
      E-value: 9e-82; Score: 301.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Cytochrome P450 3.3e-86
    HMMPanther CYTOCHROME P450, SUBFAMILY 71C 3.4e-184
    HMMPanther Cytochrome P450 3.4e-184
    superfamily Cytochrome P450 4.2e-110
    Gene3D Cytochrome P450 8.7e-104
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, E-class, group I 2.2e-31
    FPrintScan Cytochrome P450, C-terminal 3e-10
    FPrintScan Cytochrome P450, C-terminal 3e-10
    FPrintScan Cytochrome P450, C-terminal 3e-10
    FPrintScan Cytochrome P450, C-terminal 3e-10
    PatternScan Cytochrome P450, conserved site 0

    See the detailed result >

    AT3G48310.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 71, subfamily A, polypeptide 22
    Curator Summary
    putative cytochrome P450
    Computational Description
    "cytochrome P450, family 71, subfamily A, polypeptide 22" (CYP71A22); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 71, subfamily A, polypeptide 21 (TAIR:AT3G48320.1); Has 32713 Blast hits to 32486 proteins in 1636 species: Archae - 45; Bacteria - 3163; Metazoa - 11763; Fungi - 7101; Plants - 9557; Viruses - 3; Other Eukaryotes - 1081 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR