K27908

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27908

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27908

Determination of introduced cDNA(s)

  • J033096J18 - Rice Full-length cDNAs - Original: J033096J18

    full reading [+] show sequence

    Nucleotide sequence: J033096J18 - full reading 
    GCCCGGCGCG CGTCCAGCCC CCCAGATGAA CAAACAACAG CAAACCAAGC 
    GCGACGCGAG ACGGAAATGG GGCGGAGAGA GTAGCGCGTA ACCCGCAAGC 
    TCCACGCCAC CACCACCCTC CCCGAATCCA ATCCAAGCCC TAGCGCCAAC 
    CGCCGCCGAC GAGGACGCCA AATCCCTCGA TCTCCTCCTC CTCCTCCGCC 
    TTCCGCCCCC CCAAAACCCT AGCCCCGGCG GGAGGAGGCG GCGGCGGCGG 
    CGGGGGTGCA GATCTTAGGA TGTCGGACTC CGCGTCCATG GCCGCCGCCA 
    TCGAGGCGCG GTTCAGCGGC CGCGACCTCA TCGGCCGCGG CTCCTTCGGC 
    GACGTCTACA AAGGGTTTGA CAAGGAACTG CATAAGGAAG TTGCAATAAA 
    AGTTATCGAT TTAGAAGAAG CTGAGGATGA CATTGAAGAC ATCCAAAAGG 
    AGATATCTGT TTTGTCACAA TGCCGTTGTC CATATATAAC TGACTATTAT 
    GGCTCATATC TTCATCAAAC GAAACTGTGG ATAGTAATGG AATATATGGC 
    TGGTGGTTCT GTCGCTGACC TACTCCAAAC TGGCCCTCCT CTAGATGAAT 
    TGTCTATTGC ATGCATTCTG AGGGACTTGT TACATGCAGT TGAATATCTT 
    CATTCAGAAG GAAAGATTCA CCGTGACATT AAAGCGGCAA ATATCCTCCT 
    GACTGAAAGT GGAGATGTGA AGGTTGCAGA CTTTGGTGTT TCTGCGCAGC 
    TGACTAAAAC AATGTCAAGG AGAAAGACAT TTGTTGGAAC TCCCTTTTGG 
    ATGGCACCTG AGGTTATTCA AAACTCTGAC GGGTACAATG AAAAGGCAGA 
    TATCTGGTCG TTAGGTATAA CTGCTATTGA AATGGCAAAA GGTGAACCCC 
    CTTTGGCAGA TATCCATCCC ATGAGAGTTC TTTTCATGAT ACCTCGTGAA 
    AATCCTCCTC AGCTTGATGA GCATTTCTCT AAACCGATGA AGGAGTTTGT 
    GTCACTATGT TTAAAGAAGA ATCCAGCAGA GAGGCTAAGT GCCAAGGATC 
    TTCTTAAGCA CCGCTTTGTA AGAAATGCTA GAAAATCTCC AAAGCTTCTG 
    GATAGAATAA GAGAGCGACC GAAGTTTCCA GTAAAAAGCA GTGCGGATGC 
    CACACAAAAT GGTCGAACAC ATGTTGAAGA AGATGATGGT ACTGGTACTA 
    TCAAGGTTGA GAGGGCTACA AGGGATGTAG TCTCTCCTTC AAGTCAAGGA 
    ACTGTTAGGA AAGCTGCTGG CTGGAATCTT CCAGACAGAT CAGAGGGCAC 
    AGGAACTGTT CGAGGTGGTT TAAAGCCATC ACAAGTCACC TCCACCAAGG 
    ATAGTAGATC CGATGCTTCT CATAGTCCAA ACACACCAAA ACGTACAGCT 
    GATCGAGAAA ATCAATGGAG AACATCATGG ACGGGGTCTG AAGAGTCGAT 
    CTCAACAAAC CCGTCGCAGA GAGATGCACA AAGTGAATAT GGAAGACTAG 
    AGAGTTCTAC AGAAGATAAT GACCAATCTA TAAGTGGGTC TGGAACTGTT 
    GTACTGCGCT CGCCAAGAGC ATCTCAGGTG TACCCTGCAG CTACTAACCA 
    CAGTTCCAAG CCTCCCAGTA GATTCTCCTC GTATGAAGAC ACGTCTATCA 
    GTGGGACAGT CGTTCGGAAT CAAATTGAAG AACCAGAAAC TCCACGATCT 
    TCAAGGTCGA GACTGGGAAT CCAAGAAAAG TCACCAAATG CTTCACTGGA 
    GGACAGTGCA ACTAACCTTG CAGAGGCAAA GGCTGCTCTC CAGGCTGCGT 
    TTAAAAAGGG TAATGCTCGT GAAAGACATG TTATCAGCAA ACATGAAAAG 
    GAATCACATG AACCCAGAAT TTCGGCAGTA AACAGTCATG ATGCCCCAAG 
    TGAGAATGCT GACATGGAAA AAGGTCGCAA ACCACGCCAG ATACATGATG 
    GACAATCAGC TCCTCAAGCT TCTGGTTCTG TATCTTCACC TGCACTCTCG 
    TCATTGATAA TTCCTTCTCT AAAAGAGGCT ACTGGTGACA AGTTTAACGG 
    ACCAGTTGTT CATACATTCC TTGATTCCTT GATGCATCTC GAAAAAGAGC 
    TACCTGGATC TTGTGAGGTG CTGATTGGCA GAATGCTCCA TCGGCTAGGG 
    AGCTCGAAGG AGTCCTCGCT GCAAAGTCTT CAAGAGACGG CGACATCAGT 
    TTTCGCAAAG AAATCTGAAC CTCCCTCTGA ACCTCCAAGT AACAAGAAAA 
    TGGCTAATAC ACCTTCCTTG GCTGCCCCTA CCGTAAGCCC TTTGGCGAGG 
    TTCCTTCTTA CAAGGTGGCA AAACCAAGTT TCCCAAGATC TTAACTCCGT 
    CTGAAGACAA TACAAAAAAA AAAAAACCCG TCATGATTCA ATGTATAATT 
    AATTTTGAGT GTACATAACG CTATGGTTAG AAATCTCTTT GTTGCTAGCT 
    GTTCTCAGCA GCTTGTGCTG CTACCGGTTG TTTCATTTGT TTGTGTTCGC 
    GGTGAATAAC ACATTTTCTA CCCATTTTAT AATGTAACTT TGCACCCACT 
    GTACCTGTAT ATCACCTGAG GAACATTAAT AACACATCAA TTTTTTTCC

    Gene models with high sequence identity

    1. AT3G15220.1 [+] show detail - Protein kinase superfamily protein
      E-value: 3e-176; Score: 616.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Serine/threonine-protein kinase domain 7.4e-98
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.1e-22
    ProfileScan Protein kinase, catalytic domain 50.181
    PatternScan Protein kinase, ATP binding site 0
    HMMPfam Serine/threonine-protein kinase-like domain 2e-70
    Gene3D no description 4e-59
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPanther GERMINAL CENTER KINASE FAMILY PROTEIN, GCK 2.6e-190
    HMMPanther MAPKK-RELATED SERINE/THREONINE PROTEIN KINASE 2.6e-190
    superfamily Protein kinase-like domain 2.5e-89

    See the detailed result >

    AT3G15220.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR