K27923

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27923

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27923

Determination of introduced cDNA(s)

  • J033095J08 - Rice Full-length cDNAs - Original: J033095J08

    full reading [+] show sequence

    Nucleotide sequence: J033095J08 - full reading 
    GGTTCCCCAC ACTCTCCTCA CAGTCACCAA TGCCGAAGCC CAACCATCGT 
    GCCCGCTCCG CCGCTGCCGG CGGCGGCGGG GGCGGCGGGG GCCCGATAGA 
    CGCGGATTGG AAGTACTTCC TCGACAATGT CCGCGAGGAA GGCCACTCCT 
    ACGCCGTCCG CGTCCCTGCC GACGGCGCCA ACCCTTCCTA CTACCTCCAA 
    TACGAGAAGC CCCTCACCAA CGGCGCCGCC TCCACCTCCT CCCGGGGCGG 
    GGCTGCACGC AAGCGCTGCC GGATGGAGGA GGAGGAGGAG GAGGAGAGCT 
    CGTCCGGCGA ACCCGAACCC GCACCCGACC CCGACATTGA AGAGGACTAC 
    CGCGTGTTCC TTCAGAACGT GCGCCTCGTT GGGCATGGCG GCTTCGTGCT 
    GGAGCATGAG GGCAATGTGA TCAGGTACGA TGCTTCGGGC GCGGCGCTCA 
    GCTCGGATGA GTCTTCCGAT GAGTCCGTGA TGGGTGCTCC GGAGCCCGAT 
    CCGCGTCGAC GAAAGGCGAA AATTGTGGAG GAGGATCAGG AGGAGGAGGA 
    GGATGTGAAG AATGAGGTTG CCGTTCCGTC TAGAAAGAAA GATTTTACCA 
    TGGTAAAAGA GGATCAGGAG AAGAAGGGGA AGAGAGTGGT CGACCTTCCT 
    GCTAGGGGGG AAGATGGTGC CATGGTGGCG GAAGAGGATC GGAAGAAGAA 
    GCTCAGAAAA GAGTTCAACT TTCATTCCTT TCATTCTAAG GGGAAAGATG 
    ATACAACACC AGTGAAAAAT CTGAAGGATA AGAAGAAAGA GGTTAAAAAT 
    CCAAAGGATA AGAAGGTTCA TGGGAAGAAA GAGGTTGCCC TTTCTGCTAA 
    GGGGAAAGAT TGTCAATTAG CAGAGGGTGT GGTGATCAAG GTGGAAGAGG 
    AAGATGGGCA GTTGCAGATT GTGCCGGCTG TGGAGAAACT AGCGACTACA 
    ACTAGACTGA CAAACTTAAG CAATGGCCAC AAAACCGCCC CTCGTATCGC 
    TTCGGGGTCA CATGGAGTTA TATGGCCAAT ACATATAAAT GATAGGGAAG 
    AATCGGATTT CAAGCAAAGA TTGATACATG TTCTCAACAA ACCCTTTAGC 
    CAGGGAGAAT ATGACAAACT CTTTGGTATG GCTACTATTC GCAATCCATT 
    GACAAGGGAA CGTCGGACAC GCTGTGGTGT GAAGTATTAC TACTCTCAAC 
    ATGAGAAGGC AAAATCATAT TTTGATTGTT ACCCAGATCT TGCCAAACAA 
    GTTGAAGAAG CCAGCTATCC CAATCGCTTG GCTCTGTTGC GTGGGCTTTT 
    CTTCTGGTTG GAGAATATTG GGCAAGATGA TCAATTCAGG CCGTGGAGAG 
    ACGATCACAA ACGCTACAAA ATTATGTCTC TCTGAGAACA CATAACAAAG 
    TTCTTACTTG CATGTGATTA TCTGCAGCAT CTCGCCCATC ATTGTTGTAA 
    ATACGTACCC AGTAAAAAAC CGTAGAATGG AAATGGCACT GAATTTAGGC 
    CCTTCTCTAG TCTCCATAGA TAGGATAACC TTGGGTTCTC TCACCTTCTC 
    TTTGTGTAAC TGAGTATGGG GTTGACTAAA ATGTGTTTAG AGAATGTTTA 
    CTTGTACTAA CTCAGTCCGA ATTCTGGAAC ACCCTATGGC TCATGGCTTT 
    CTATCGGAGG AGCAAAACG

    Gene models with high sequence identity

    1. AT1G77270.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); ...
      E-value: 7e-13; Score: 72.80

     

    InterPro Scan Digest

    See the detailed result >

    AT1G77270.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits to 388 proteins in 92 species: Archae - 0; Bacteria - 31; Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR