K27949

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K27949

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K27949

Determination of introduced cDNA(s)

J033121F18 - Rice Full-length cDNAs - Original: J033121F18

full reading [+] show sequence

CGGAGAAAGC AAAATACTAG CGGCCGCCAA GAAATTCCCC CCCTCTCGCC 
CTCGCCTTCT CCGAGTTTCC AGCATATGCG CCCCGGATTT TCCTTCAGAT 
TTGCCTAGTT TTTCTCCCTC GCTCTTGACT CGCGATCTCC CGATCTGGAG 
GAGGGCGGTT GCGGCGGTGG TGTCGTTTGC GGATTGGATT CTTTGTCTGA 
TCTCGCGTGG TGAGGATCTT GTCTGTGTGG ATTCGCGGGT TTCTTGGATC 
GGAAAGGGGG AATGCTGGTA TCAATATGCT AGCCCGCGGA GCCGTGCGGT 
CGCTGTTCGA TCGTCTCCGG CCGCCGCCGC ATCACCGGAG GAGGAGGAGT 
AGCCCCGCCG CGATTATGCC GGCCGCCGCC GCCGCCCACC GTGGCTGCTT 
CTGCAGCCTC AGCCACTCGA ATCTGTGCGG GGAGGGCAGT GTGATTCAGA 
GGAAGGGATT TCTTGATCTT GGGATGGGTC GGAGGTTCGC GCCGGGCAGC 
GCATTGGGAT CCAAGGGATG CCTGAATTGG CAGGATCGGG GTAGATCCAA 
GAGGGGGGTG GATGGTGGCG AGGCCGTGAG GATCAAGGCG CAGGTTCTGG 
CGCCGCAGCG GCAGCTGCTC CATGACCCGG AGGTTCTGCC ATTGGAGGAG 
GTTGCCACGA AGAGCTTGAA CGGGAATGGC GCGTGCCGGC GTGGGAAGCC 
GCTGGGTTTC CCCGAGAACG CTGCGCCGAC GAAGATGGTG GTTGCTGTTG 
ATGTGGATGA AGTTCTTGGA AGCTTTCTTG CTGCTCTCAA CAAATTTATT 
GCGGACCGTT ATTCTTTGAA TCACTCAGTA TCAGAATACC ATGTGTATGA 
GTTCTTCAAG ATATGGAATT GTTCTCGAGA AAGAGCTAAT TTTCTTGTCC 
ATGAGTTCTT TACAACCCAT TACTTCCAAG ATGGTATACA TCCTATCCCC 
GGTGCCCGAG ATGCTCTGCA AAATCTCTCT TCTTTCTGTA GCTTATCTGT 
TGTCACATCT CGGCAGGATG CAATTAAAAA TCACACATTA GACTGGATCG 
ACAAGTACTA TCCAGGGTTA TTTGAGCAGA TCCATTTTGG AAACCATTTT 
GCTTTGCAAG GTCAATCAAA GCCAAAATCA GAAATTTGCA GATCTTTTGG 
TGCTCAGGTT TTGGTAGATG ACAACCCCAG ATATGCTTTA GATTGTGCCG 
AGGATGGCAT GAGGGTCCTT CTCTTTGATT ATCACAACTC GTACCCTTGG 
TGCAAAACTG GTGTTGACGA ATCGCATCCG CTGGTGACCA AGGTTCACAA 
TTGGCAAGAA GTTGAGGAAA AGCTTCTTTC TTGGGTAGTA CCAGAGTTCT 
GACACTTGAT TCGGTAGGAG ACGCACCATT TGAGAGCAGC AGATGTCTCG 
GTAGACTTTG ATTTCTGAAG AAACATGTTC AACCCATTCC AGTATGTCAG 
AGTTAAATAG GATCTACAAC ATCCCTAGGC AAAGACTGGC AGAATGAACG 
TTGTTGCAGA ATGAAGGTCT GGAAGGCTCC AGTTTTAGTA TGTCTCCCAT 
GTGATTCAAG ACGAATTTGC AATGTTGACG ACTGAAACCG TCTTCACTCT 
TCAGTTCTTT TACCCTGCTG TGGGGTGTAT ATATTGACAC TGCTATAACC 
TCAATGAATT TGGGGAACGC TTCAT

Gene models with high sequence identity

AT4G33140.1 [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
E-value: 7e-90; Score: 328.00

InterPro Scan Digest

Program	Description	E-value
superfamily	HAD-like	6e-12
HMMPfam	NT5C	1.1e-10

See the detailed result >

AT4G33140.1

Model type: Protein coding
Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 5'(3')-deoxyribonucleotidase (InterPro:IPR010708); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR