K28226

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28226

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28226

Determination of introduced cDNA(s)

  • J013023H09 - Rice Full-length cDNAs - Original: J013023H09

    full reading [+] show sequence

    Nucleotide sequence: J013023H09 - full reading 
    GAGAAGTTCC TTCCTTTGGT CTAGCTAGCA AGAGATCTTA CTTGTGAGAG 
    GAAGAACAAG AGGAGGAGAG GTAGTATAGC CTTGGCCTTC TTTCTTCAGA 
    TGAATTCAGA AGTAGGAATT CTTGGTTGAG ATTATACTGC CCATGCCAGT 
    GAGCTGACAA GAGAGAACAA AAATGGAGAA AGAACACATC AAGATGGCCA 
    TCCTGAAGCA GGAACAGACA TTCAGACAAC AGGTCAATGA GCTGCATCGT 
    GTGTACCGGG TTCAGAAGCA ACTGATGATA GAGATGCAGA GCATCTCAAC 
    CCAGGCTCAA GCAAAAGCAG ACAACCGAAC GATACCAAGA TTGGAGATGG 
    ACCATCAACA ATGGTACAGA AACTCGGGGG AGAAGAAGGC CCCCGAATTC 
    GTTGAAGATT TCGACCTTGA ACTCACACTG GCAACTGGGG CTGGTAGGAA 
    GCAGGAGAAG CCATCCAACT CGGACTCCGG AGCAACAGTG TCATCGTCGA 
    CTTCTGCTGA ATCAGAGTCG GAGCAGCGGT TCCCTGAGTC CAATGTAGCC 
    CTAAGGTTTC AGAATGAGAG CAAGAGGCAT GATGATCAGC TCATGCAATC 
    TCCTTGGCTC TATCAATGTT TAAGTCTGAA GATGGCATGA TGACTTAGCT 
    ATGATGGGTG GCTTTATGAG TGTTCAAAAA CTCAAAAATC TCAGATAAAA 
    AAAAAAGGCT TCTTTTATGT ATATGTATAT GACACTAATT CAGAGTAACT 
    GGAAGGCTCA AAAGAGTG

    Gene models with high sequence identity

    1. AT5G67390.2 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (D...
      E-value: 3e-07; Score: 52.40

     

    InterPro Scan Digest

    See the detailed result >

    AT5G67390.2

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR