K28233

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28233

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28233

Determination of introduced cDNA(s)

J013154A01 - Rice Full-length cDNAs - Original: J013154A01

full reading [+] show sequence

GTCGCGGCTG CTGCTCTCCG CGTCGTCTCT CCCTCCGGTT CGCCGGCCGC 
CGCCATGGCG AACAGCCTTC TCCACCTCCC TCCCGCCCAA AAAAAATGGG 
GGCAGATCTC GCCTCCAAGT CCACGACCCG TACACTCGTG TCCCTAGGAG 
TCCACCACGG CGGAGGCGCT GCCCTCCGTG GCGGCGCCGT CGGAGTGGTG 
GGGGCGAGGC CGAGCCATCA GCGAGCCGAG CACACGGGCG GCGGCGGCGA 
GCGCGGGCAC CGCGGGTGCT GTGGTGGTAG CGCGCCCAAC CCCTCGAGCT 
TCGCCGCGCG GCGTCTTCGT CGAAGGCTCC CGCATCCTCT TCCGCAGCAC 
AGGATCAGGA GGCACCGCGA TCTCAACAGC ACCGTCAAGC ATTTGGGTCA 
CCTTATGCAT GGTAGGTCGC ATGGCTGGGT CCTCTTGGAT GCACCAAAGT 
GCTACTGCCA AAAACCTCTG TACCCTCTTA ATGTCAAATG ATGCCTCCTC 
ATCACCCTCC ACCAGTAAAT CAATTCTTCC AGAGCGATAA CAGTCATTTG 
CCCAGTCAGT AAGTGCAACA TACCCTCGAG TTCCCCGGAT ACCAGTTGTT 
GTTTGTGTTT GGTCCATCTG CAGCAGCTTT GCTAAACCAA AGTCGGATAT 
TTTTGCCGTG AGGTTGTTGT CAAGAAGGAT ATTTTGAGGC TTTATGTCAC 
AGTGGATGAT CTGTGTGCTG CATTCCTCAT GCAAGTAGAG CAGTCCTCGT 
TGGTACCAAG ATGGTCTGAT GGTGCAGAAA ATGAATTCAT TAAGTGGCCC 
GTTTGGCATG AACTCATAAA CAAGTAATCT CTTAGCACCT TCATTGCAGA 
ACCCCAGTAA CCTGACCAGG TTTTTGTGAA ATGTCCATCC AATGGTCTGA 
ACTTCCACAG CAAACTCCTT TTCAATATCT GGCAAGACCT TATTGATCTT 
CTTTACTGCA ATGTGTGTGC CAAGCTGATC TTGTAGTGTC CCCTTGTAGA 
CTACCCCAGA ACCACCGCTA CCAATTTCTT CACAGAACCC ACCTGTTGCC 
TCGTGAAGCT CTTCATAAGT GAAAGATTTC AAAGGAAGTC CCCCGGTACT 
ATATGATTGC TTTGGTGGAT CTATCTTCTT GCTTTTCTTT GCAAAATAGT 
GTCCAAAAAG GATAAATGAG ATAAGGAGGA TCAACACCAA CAAGAAGCTT 
CCAAGGAGGA GACAACTACC GAGGATCCAA TACTTCTTGT CTTTCTTCCA 
TTTGATGGAG CCAGTATTAA TAATAGACAG GGAATTGTTG TTCTTGGGCA 
CCTTCAGATA AAGTGTTCTA TCAACACTAC TGTCCATTCT TCCATTGGAC 
ATGGGGAGTT TCTTCTTCCA ACAATTTCCT TCATTAAACA CTGTCACAGC 
ACAGAAGCAA TCTGTCAAGC ATAGTTTCTG GCAGTCATCC ATGCCAACAG 
AGGTGAATGA CTCATAGTCT GCACTTGGCC AATCTATGCC TTTCATTGGG 
ATCAAATCAA ATTCATCAAT CATGGTTGCC TCATCCAAAT CACAGCTTTG 
TTGTTGGAAG TTTGCTTTGC ATCCTTTGTA CTTCCGTGCC TCATCTATGA 
ACGAGTAATG TGGTGGACAT TGGCATTCCA CTGTCTCGTT CTGGTTCCAG 
TTGAAGCTGC AATAGCTGTT GAACCCGCAT GCACCACTTC CATCTGAGGT 
AGTGAAGACA TCACATATGT TCCTGGGGAT GAAGTCCACA GCAGTCCAAC 
CTATGTACTT CCACCCTCTG GTTACTGCCT CCTTCTTTGG GTACACATAT 
TGACGGAACA CACCATCTGG GTCTAGGGTT GCACGCTGGT AGTAGTTCAC 
CATTGAACCC ATGATGGTAG ATGTGATAGT AATTTCAGTG CCATCCTTCA 
AGGTGAAGTA GACCCCTCCA GTTTCATTGA ACAGAAGCTG TGAGCCATTT 
CCACCAGTGT TGGGGGTCAA GTATGAACGA TACTTGTTTC CTGAGGGAAC 
AGCAACTAGA TCAAATTCAA GGTTTCCATC TTTCACTTGA AGTAGAAATC 
GGCCATTAGA GTAGTCTGCT TGTGTCAGCC TACTGTAGAG TTGAACTTCA 
GAAAATGGCC CTTGTGTGGG CAGGATGGTG TCCGCTGGGC TATCAAAGGT 
TCCCCACTTT GTAGAGCCAT CTGTACCAAG AAGCACAAAA TTTCCAGTAT 
CAAGCATGTT GGCATAAGCT GCACCAGGGA CTTGGGGGTT CCAAAGCTCA 
TGGCCACCAG GGTCAAGGAG TGACAGACCA TTAGAGCTAA GCTGAAGTCG 
AGAACCAGAA GGCACCAATA CTACCTCTGG TACTTGTGTG TTGGTCTTAG 
CGTACCATGC CATGCTTTTG TTGACAGTCT TGTCGAACCA GACGGCAAGG 
AGGTAAGTGT TGGTGCTGAT GAGTTGGAAG CCGAATGCAA AATCACCGGA 
GGGTGAAATC CACGATGTGT TCACGCCTTC GGTGGTCAGC AACGAGCCCA 
GGGTGATGTT TCGAGCTTTA GAGGGAGCTA TTGTGAACAC TAGGAGGAGG 
ACGAGGAGGG TGAGGAGAGG TTCCATCATT TTTGCGATGG TATGTGTTCA 
TGAAACAGCT TTGTGTGCTG CCGCAGCTAT ATCATGGCAG GGATCAGGGG 
TCTGCTTGAC TTGGAACACT GAAGTGACGA CTTGCAAAGA CCAGTAGTGG 
GTTCCTCCAC CACCAAAGGA GAAGGCATAT CTAATCTAGC TGTTGCAGCA 
TTTATCATTG AACTAATAAG GACAGACAGC AAGGGCCTGC TTTGATTAGG 
GACGTTGATA AAGGGGGAGA CTCTGAAAGT TCAGCAACTG AGCAAAGGGC 
TTAACTGATG ACATAGGGTG AAAGCACATT GTTGTTCCTA AAGAACTTCA 
TATTTTACTT GTACTTACAG AATGTGAAAA TTTGAGAACT TGGCACCGCA 
TTATCAAGTT GGTGACATAT TGATTGACAG TCCTAAATTT TGTGAGAGAA 
AGCGTACTGT GTAGTATGAG TACTAGAATG TAGGAAGGAA ATTCACG

Gene models with high sequence identity

AT5G60900.1 [+] show detail - receptor-like protein kinase 1
E-value: 4e-117; Score: 419.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Protein kinase-like domain	1.4e-51
superfamily	Curculin-like (mannose-binding) lectin	7.5e-15
Gene3D	no description	1.6e-16
Gene3D	no description	2.2e-26
ProfileScan	Protein kinase, catalytic domain	20.372
ProfileScan	Curculin-like (mannose-binding) lectin	8.822
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
HMMPfam	Serine/threonine-protein kinase-like domain	5.1e-29
HMMPfam	Curculin-like (mannose-binding) lectin	9.1e-12
HMMPanther	RECEPTOR PROTEIN KINASE ZMPK1	2.6e-114
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	2.6e-114
HMMSmart	Curculin-like (mannose-binding) lectin	0.0012
HMMSmart	Serine/threonine-protein kinase domain	7e-12
HMMSmart	Tyrosine-protein kinase, catalytic domain	4.6e-11

See the detailed result >

AT5G60900.1

Model type: Protein coding
Short Description: receptor-like protein kinase 1
Curator Summary: Encodes a receptor-like protein kinase.
Computational Description: receptor-like protein kinase 1 (RLK1); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT1G34300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR