K28239

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28239

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28239

Determination of introduced cDNA(s)

J013066I06 - Rice Full-length cDNAs - Original: J013066I06

full reading [+] show sequence

GACTCATCTA ATACCGAATT ATTAGCTGGA GAGATCGATT CAAGGCTATT 
GTCTGGATCG AATGATTTGT CCATGGAGTG TAGCGGCGGC GGCGGTGGCG 
CTGCTGCTTC TGTCGCCGGG GGAGAATCAG ATGGTCCGAG TGTCAGCACA 
GCCGACGAAG ACGAGGTGCG CCGCCGGCGT CGTCGACACC TGCGGCGACG 
TGGGCGTGCC GTACCTGTTC GGCATCGACG GCGGTAGCTG CAGCTTCCTC 
CCGGGCTTCA ACCTCACCTG CGACCGCACC AAGCAGCCAC ACAGGCTGTT 
CCTCGGCGAC GGCTCCCACC TCCAGGTCAC CGAGATCTCC CTGGCCAACT 
ACACGGTGCG CGTCCTCAAC GGCGTCGGCA CCGTGAACTT CACCTTTGCG 
GGGCACAACG ATTCCACGGC GAAGTGGGCC GGAGTCAGCG TCGGCCAAGA 
CGACGGGCCG TACATCGTCT CAGAGGAGCA CAACCAGCTG GTGGTGACGG 
GGTGCAACAT CATGGCCTCC CTGCTCGGGA ACAGCGGCAG CAACGTCATC 
ATCGGCTGCT CCTCCTTCTG CTCCATCACC GACTGGTGGG GCGCCGACCC 
AATAGTGCAC TCCGGCGCCG GCGGCGCGTG CTCCGGCCTC GGCTGCTGCG 
ACGTCAACAT CACCATCGGC CGGCCCTCCT ACGAACTGCA GCTCAGGTGG 
CTCGACTGGG ACCACAACTA CGACGACCTC CTGCCCATCG CCGTGCGCAT 
CGCGGAGCGC GGTTGGTTCG ACGGCATGTC GACCAAGCTT CTCAGGAAAA 
ACAGCCGCAG CGCTGTTCCC GTGCCCGTGG TGCTGGAGTG GGCCGTGGCG 
TCTGTTCACA AGCCGCCCAC TCCCGTAGAC GTGAACAGCA CGTGCCCCAA 
GGACCCGGCG AGAAGCGAGT GCCGTAGCAG CAACAGCTTC TGCCGCAACA 
TCGCCAACAT GTACCGCAGC GGTTACGTGT GCAAGTGCGA CGACGGGTAC 
CAGGGCAACC CTTACCTCAC CGGCGGCTGC CAAGATATCG ACGAATGTTC 
GCTGCCGGGC AAGTGCTTCG GTGAGTGTAC AAACACGCCA GGAAACTACA 
GTTGCCGTTG TCCGCGTGGT GCGCGTGGCA ATCCCTACAC CAAAGATGGC 
TGCATCAAGT TTCCTCTAGG TCCGGGTCTA CAGAGAAAAT GGATTGGTGC 
GGGTTGGATT TGCTTTGGTG TGAGTCCGAA TGGTCCTTTC TCTCGTCTTC 
TTGGCATGTT GATGAGAAAC CAACGTGGTG GGAGGGACGG CATCACGTTG 
AACCGCAACG CTAGTGATGC TGGCGCCAAG AGAAATGTCT ATTTGTAAAA 
TAAGTTTCTC TAAGATTCTA TTTGTAAAAA AGTTTTAAAA AGATCTAAAA 
TATGAACTGC TCTAATTAAC TTGTCC

Gene models with high sequence identity

AT1G21240.1 [+] show detail - wall associated kinase 3
E-value: 4e-22; Score: 103.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LATENT TRANSFORMING GROWTH FACTOR-BETA-BINDIN	6.5e-08
HMMPanther	EGF-LIKE DOMAIN PROTEIN	6.5e-08
HMMPfam	EGF calcium-binding	0.00014
superfamily	EGF/Laminin	4.7e-08
superfamily	EGF/Laminin	3.5e-06
PatternScan	EGF-type aspartate/asparagine hydroxylation site	0
PatternScan	EGF-like calcium-binding, conserved site	0
HMMSmart	EGF-like	17
HMMSmart	EGF-like calcium-binding	9.9e-05
HMMSmart	EGF-like	4.1
ProfileScan	EGF-like, type 3	9.119
Gene3D	no description	0.00028

See the detailed result >

AT1G21240.1

Model type: Protein coding
Short Description: wall associated kinase 3
Curator Summary: encodes a wall-associated kinase
Computational Description: wall associated kinase 3 (WAK3); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EGF-like calcium-binding (InterPro:IPR001881), EGF-like, type 3 (InterPro:IPR000742), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), EGF-type aspartate/asparagine hydroxylation site (InterPro:IPR000152), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like calcium-binding, conserved site (InterPro:IPR018097), EGF calcium-binding (InterPro:IPR013091), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: cell wall-associated kinase (TAIR:AT1G21250.1); Has 137245 Blast hits to 122966 proteins in 4824 species: Archae - 125; Bacteria - 13959; Metazoa - 61902; Fungi - 9553; Plants - 33418; Viruses - 443; Other Eukaryotes - 17845 (source: NCBI BLink).
Link: InterPro Scan - TAIR