K28331

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small) decreased width (PATO:0000599) (Cauline leaf::Shape::narrow) abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997) (Seed::Number::few)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28331

Determination of introduced cDNA(s)

J013068F02 - Rice Full-length cDNAs - Original: J013068F02

full reading [+] show sequence

GACTAGAGAT AGTGAGAGAA GATAACAAAG TGTGTTCTCG CTGACGAACC 
AAGAATGCAG TGTCACTCAT CCACAAATGG TGATGCTTGT TTGCTGCGGA 
CAACCGGAAG AAGCAGAATT CGGCCGATAT AGTACCAAAT TGCAATAAGA 
AAATGCATCC ATATTCACTT AAAAGTTCCA AGGGAGCACC GTTTCCACCG 
CGACCGATTC TTGTCTTCCT CATTGCAATA TTTGGATTCT ATGTATGCTA 
CATCTCCTTT AACCAGATAA CACTAGAGAA TAGATCTGAG GAGAACAGTG 
GAGAAGTGCA GGCAGAAATT CATTGCCGAA AGCCTCATCT TCCTCATGAG 
GAGCTGCGTT ATGTGCACTT TCCGAAACCT GAGAGTTATA GCAGGGGAGA 
GTGTTCCTGC AATCTGGTTC GATCCTTTGT GCTTGTATCT ATGCAACGGT 
CGGGAAGTGG ATGGTTTGAG ACTTTGCTGA ACAGCCACCC TAACATCAGC 
TCAAATGGTG AAATATTTAA CAGGGTGGAT AGAAGAGAGA ATATCTCATC 
TATCTTACAG ACCCTTGACA AATTGTATAA TTTGGATTGG TTCACCAGTG 
CAGCAAAGAA TGAGTGCACG GCTGCATTTG GATTGAAGTG GATGCTAAAT 
CAGGGGTTTA TGGACCATCA TGATGATATA GCTAGTTATT TAAACAAGAA 
GGGTGTTTCC GTGATATTTC TCTTCAGGAG AAATACATTG CGCAGGCTTA 
TCTCTGTTTT GGCTAATGAT TACGACAGAG ATGCGAAGCA GCTGAATGGA 
ACCCACAAAT CCCATGTACA CTCAAAAGAA GAGGCTGAGA TATTAGCGAA 
ATTCAAGCCG GTGCTGGATG TGTCAAATCT GATTCCAAAC ATCAGAAATG 
CCGAGAAATA CATCAGAGAT TGCTTGGACC ACTTCAACAC CACACGGCAC 
ATGATCCTCT ACTACGAGGA TATTGTCCGC AACAGAAATG CATTGTTCCA 
GGTACAAGAA TTCCTCGGAG TTCCGGTGAG AAAGCTGGTC AGCAGGCAGG 
TGAAAATTCA CACTAGTCCT CTTCCAGGCC TTGTCAGGAA CTGGGATGAT 
GTGAGCAACA AACTGAATGG GACACAGTAT GCTCATTTTC TTGACGGTGC 
AGATTATGTC AGGTGATCTA CATGGATGTG AGCGACAGGA TTTTTTTTTT 
CATATGGGGT TTTAGTTGCC ATATGATTGA TTCTTTTGGT ACAAATGAGT 
TGGTAAAAGA AAGGGATAAC GATAAATAGA TCAAGATGAG AGACCTTGTG 
ATCAAATTGT ACATGCTTTC CACTACTCAT TACCTTCAGA GCTCAAATTG 
C

Gene models with high sequence identity

AT2G15730.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 7e-103; Score: 371.00

InterPro Scan Digest

Program	Description	E-value
superfamily	P-loop containing nucleoside triphosphate hyd	2e-22
HMMPfam	Sulfotransferase domain	0.00000015

See the detailed result >

AT2G15730.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G34420.1); Has 149 Blast hits to 147 proteins in 26 species: Archae - 0; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR