K28414

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28414

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28414

Determination of introduced cDNA(s)

  • J023091E03 - Rice Full-length cDNAs - Original: J023091E03

    full reading [+] show sequence

    Nucleotide sequence: J023091E03 - full reading 
    GAGCTACTCT GCTTCGGTGT TGGTTATATC CACGAGAGTA CGAGAGACGC 
    GCGCGGGCGC GAGCTGAGGT TGCTGCTGCA GCGCAGGCAA AGAGGGGCAA 
    GCTAGCGCAA GCGACGCTAA GCCCGCGCGC GCCTGCGTGC GTGCGTCGTC 
    GGAGAGCGCG GGCGCCAAAC GGCGCCGCGG CGGAGTACGT CGAGCGTCGC 
    GTGGACGTTG GCAGCGGCAA GGTTTCCTCT GGATACACCG TTCTTGAGTT 
    TGAGTTGGGC AAGGAGGTTG TGAACGTAGC CTGAACCTGA CCTGAGATTG 
    TGAACGTAAT TTTGGGGGGA AAGGTTGTTC TGTACTGTCT CTTCAATCTG 
    TGAGTTCGTG ACAGGTTCTT GCAAAAACCA AAACATCATC AGTGAAAAAT 
    TGTTCGTAGC ATTTTAGCTC TAGTATAGAT CGATCAATCG ATCGTTCGTT 
    CGTTCGATCG TTCGAGGACG AGAGATTTGC TAACATGGCG TTGGCAGGGA 
    CCTCCAAAGT AGTGCTGGGA TGTGTCGCGT TTGGGATATT CTGGGTGCTG 
    GCCGTCTTCC CCACCGTCCC GTTCATGCCC GTCGGCCGTA CGGCCGGCTC 
    CCTCCTTGGC GCCATGCTCA TGGTCCTCTT CCGTGTCATC TCGCCGGAGG 
    ACGCCTATGC CGCCATCGAC CTCCCAATCA TCGGCCTCCT CTTTGGCACC 
    ATGGTCGTCA GCATCTTCCT CGAGAGGGCT GACATGTTCA AGTACCTCGG 
    CAACCTGCTC TCCTGGAAGA GCAGGGGCAG CAAGGACCTG CTCTTCCGCG 
    TCTGCATCGT GTCCGCCATT GCCAGCGCGC TCTTCACCAA TGACACCTGC 
    TGCGTCGTGC TCACCGAGTT CATCCTCAAG GTTGCCAGGC AGAACAACCT 
    GCCGCCGCAG CCGTTCCTCC TCGCCCTCGC CACCAGCTCC AACATCGGCT 
    CCGCGGCGAC GCCCATCGGC AACCCGCAGA ACCTTGTCAT TGCCGTGGAG 
    AGCGGCATCT CCTTTGGACA GTTCTTGCTT GGAGTTTTCC CGGCGATGAT 
    CGTCGGCGTC CTGACAAATG CTGCCATCCT CCTCTGTTAC TTCTGGAAGT 
    ACCTTTCAGT GGAGAAGGAT CAGGAAGGCG GGCAGCCGGC TGGGCCGGAG 
    GTGGTCGCCG ACGACGAGGT CACCTCACAC AGGTTCACAC CTGCAAGAAT 
    GTCACACGTC TCATCTCTGA ACCCGGATGA TATGGACTGC ATAAGTGAGC 
    CAATCATCAG GAGCAACAGC GTGAGGAGCA CCAGTGCTAA TGAGAATCTG 
    AGGAGCAGGA GTGTGAATTC GGAGGCGGAC ATACAGCTCG CGATCAAGTC 
    GCTCCGGGCA TCGAGCATGT CGCATGAGAT GGTCGAGGTC TCAACTGTCA 
    CTGACAGGAG GGATGAAGGT GCATCCTCCA GGAAGTTCAC AAGAACTGCT 
    AGCCAGCAGA GGAGTGTGAT CATAGAGGAC TCGCCGCCGT CTCCCGCCAG 
    CAATGGCGAC AAGGAGAAGG AAGATGAGGT TGCGGAGAAG AGATGGAGGG 
    TGTTTGTGTG GAAGACTGCT GTTTATCTCA TCACTCTTGG CATGCTCATT 
    GCACTTCTCA TGGGGCTTAA CATGTCATGG ACAGCCATCA CTGCGGCTCT 
    TGTTCTTCTG GCGCTTGATT TTACTGATGC ACAGGCTTGT CTGGAGAAGG 
    TGTCATACTC ATTGCTGATC TTCTTCTGCG GGATGTTTAT TACGGTCGAT 
    GGCTTCAACA AAACTGGCAT ACCGAACACA CTTTGGGAGC TCGTTGAACC 
    GTATTCACGA ATTGACAGTG CTAAGGGTGT TGCTCTTCTT GCTGTGGTAA 
    TTCTTATCCT CTCAAATGTG GCCTCAAATG TTCCCACAGT ACTACTGCTC 
    GGCACAAGAG TGGCTGCATC AGCTGCTGCA ATCTCTCACG ATTCAGAGAG 
    GAAGGCCTGG CTTATCCTAG CGTGGGTCAG CACCGTTGCC GGGAACCTCA 
    CACTACTGGG CTCGGCTGCG AACCTCATCG TCTGCGAGCA GGCTAGAAGA 
    GCTCAGTTCT TCGGCTACAA CCTCTCCTTC TGGAGCCACC TCCGGTTCGG 
    GGTGCCGTCG ACCATCGTCG TCACGGCGAT CGGGCTGCTC ATCGTCACCA 
    GTTACTGAAG AAGAAGAAGA AGAAGAAGAA GCTGACAGCA GCATAAGGTA 
    GCGTACAAGA AGGAGATAGA TGAACGAACC CTTTGGATCA ATAAGAGAGA 
    GTACATGTAA AATTTCTAAA ATAGGCTTGT CCTGTAAAAC TCGTGTGTGT 
    TTTGTGTGTA TCTATGCCAG CTGCTGCGTC TGTGCCCTTG CTCTTTTGTT 
    GTCGCTAAGC AGACGGTGAT TGAGAAGGAT GCAGATGTAG CAGGCTAAGC 
    AACCTGCATT TTCAGTGTTT TTCTTCAGAG TCGGAAGTTG CAAATAGGGC 
    GAGTAAATGA AGAATGCTAT GACAATCTGA TTTTAGTTTT TATATTTGTT 
    TCCTACTCAA TTAATTTGTA GCCGCGGTAG AATTTTGGAA ATGGTGTTTG 
    TACAACTGCA CATGCGCATG GTTACTACTA GATCAAATTG TTTTTTCCGC 
    GGGAAAAAGG CC

    Gene models with high sequence identity

    1. AT1G02260.1 [+] show detail - Divalent ion symporter
      E-value: 6e-174; Score: 608.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Divalent ion symporter 1.5e-109
    HMMPanther ARSENITE TRANSPORT PROTEIN 0
    HMMPanther CATION TRANSPORTER RELATED 0

    See the detailed result >

    AT1G02260.1

    Model type
    Protein coding
    Short Description
    Divalent ion symporter
    Computational Description
    Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR