K28414

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28414

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28414

Determination of introduced cDNA(s)

  • J023091E03 - Rice Full-length cDNAs - Original: J023091E03

    full reading [+] show sequence

    Nucleotide sequence: J023091E03 - full reading
    GAGCTACTCT GCTTCGGTGT TGGTTATATC CACGAGAGTA CGAGAGACGC 
    GCGCGGGCGC GAGCTGAGGT TGCTGCTGCA GCGCAGGCAA AGAGGGGCAA
    GCTAGCGCAA GCGACGCTAA GCCCGCGCGC GCCTGCGTGC GTGCGTCGTC
    GGAGAGCGCG GGCGCCAAAC GGCGCCGCGG CGGAGTACGT CGAGCGTCGC
    GTGGACGTTG GCAGCGGCAA GGTTTCCTCT GGATACACCG TTCTTGAGTT
    TGAGTTGGGC AAGGAGGTTG TGAACGTAGC CTGAACCTGA CCTGAGATTG
    TGAACGTAAT TTTGGGGGGA AAGGTTGTTC TGTACTGTCT CTTCAATCTG
    TGAGTTCGTG ACAGGTTCTT GCAAAAACCA AAACATCATC AGTGAAAAAT
    TGTTCGTAGC ATTTTAGCTC TAGTATAGAT CGATCAATCG ATCGTTCGTT
    CGTTCGATCG TTCGAGGACG AGAGATTTGC TAACATGGCG TTGGCAGGGA
    CCTCCAAAGT AGTGCTGGGA TGTGTCGCGT TTGGGATATT CTGGGTGCTG
    GCCGTCTTCC CCACCGTCCC GTTCATGCCC GTCGGCCGTA CGGCCGGCTC
    CCTCCTTGGC GCCATGCTCA TGGTCCTCTT CCGTGTCATC TCGCCGGAGG
    ACGCCTATGC CGCCATCGAC CTCCCAATCA TCGGCCTCCT CTTTGGCACC
    ATGGTCGTCA GCATCTTCCT CGAGAGGGCT GACATGTTCA AGTACCTCGG
    CAACCTGCTC TCCTGGAAGA GCAGGGGCAG CAAGGACCTG CTCTTCCGCG
    TCTGCATCGT GTCCGCCATT GCCAGCGCGC TCTTCACCAA TGACACCTGC
    TGCGTCGTGC TCACCGAGTT CATCCTCAAG GTTGCCAGGC AGAACAACCT
    GCCGCCGCAG CCGTTCCTCC TCGCCCTCGC CACCAGCTCC AACATCGGCT
    CCGCGGCGAC GCCCATCGGC AACCCGCAGA ACCTTGTCAT TGCCGTGGAG
    AGCGGCATCT CCTTTGGACA GTTCTTGCTT GGAGTTTTCC CGGCGATGAT
    CGTCGGCGTC CTGACAAATG CTGCCATCCT CCTCTGTTAC TTCTGGAAGT
    ACCTTTCAGT GGAGAAGGAT CAGGAAGGCG GGCAGCCGGC TGGGCCGGAG
    GTGGTCGCCG ACGACGAGGT CACCTCACAC AGGTTCACAC CTGCAAGAAT
    GTCACACGTC TCATCTCTGA ACCCGGATGA TATGGACTGC ATAAGTGAGC
    CAATCATCAG GAGCAACAGC GTGAGGAGCA CCAGTGCTAA TGAGAATCTG
    AGGAGCAGGA GTGTGAATTC GGAGGCGGAC ATACAGCTCG CGATCAAGTC
    GCTCCGGGCA TCGAGCATGT CGCATGAGAT GGTCGAGGTC TCAACTGTCA
    CTGACAGGAG GGATGAAGGT GCATCCTCCA GGAAGTTCAC AAGAACTGCT
    AGCCAGCAGA GGAGTGTGAT CATAGAGGAC TCGCCGCCGT CTCCCGCCAG
    CAATGGCGAC AAGGAGAAGG AAGATGAGGT TGCGGAGAAG AGATGGAGGG
    TGTTTGTGTG GAAGACTGCT GTTTATCTCA TCACTCTTGG CATGCTCATT
    GCACTTCTCA TGGGGCTTAA CATGTCATGG ACAGCCATCA CTGCGGCTCT
    TGTTCTTCTG GCGCTTGATT TTACTGATGC ACAGGCTTGT CTGGAGAAGG
    TGTCATACTC ATTGCTGATC TTCTTCTGCG GGATGTTTAT TACGGTCGAT
    GGCTTCAACA AAACTGGCAT ACCGAACACA CTTTGGGAGC TCGTTGAACC
    GTATTCACGA ATTGACAGTG CTAAGGGTGT TGCTCTTCTT GCTGTGGTAA
    TTCTTATCCT CTCAAATGTG GCCTCAAATG TTCCCACAGT ACTACTGCTC
    GGCACAAGAG TGGCTGCATC AGCTGCTGCA ATCTCTCACG ATTCAGAGAG
    GAAGGCCTGG CTTATCCTAG CGTGGGTCAG CACCGTTGCC GGGAACCTCA
    CACTACTGGG CTCGGCTGCG AACCTCATCG TCTGCGAGCA GGCTAGAAGA
    GCTCAGTTCT TCGGCTACAA CCTCTCCTTC TGGAGCCACC TCCGGTTCGG
    GGTGCCGTCG ACCATCGTCG TCACGGCGAT CGGGCTGCTC ATCGTCACCA
    GTTACTGAAG AAGAAGAAGA AGAAGAAGAA GCTGACAGCA GCATAAGGTA
    GCGTACAAGA AGGAGATAGA TGAACGAACC CTTTGGATCA ATAAGAGAGA
    GTACATGTAA AATTTCTAAA ATAGGCTTGT CCTGTAAAAC TCGTGTGTGT
    TTTGTGTGTA TCTATGCCAG CTGCTGCGTC TGTGCCCTTG CTCTTTTGTT
    GTCGCTAAGC AGACGGTGAT TGAGAAGGAT GCAGATGTAG CAGGCTAAGC
    AACCTGCATT TTCAGTGTTT TTCTTCAGAG TCGGAAGTTG CAAATAGGGC
    GAGTAAATGA AGAATGCTAT GACAATCTGA TTTTAGTTTT TATATTTGTT
    TCCTACTCAA TTAATTTGTA GCCGCGGTAG AATTTTGGAA ATGGTGTTTG
    TACAACTGCA CATGCGCATG GTTACTACTA GATCAAATTG TTTTTTCCGC
    GGGAAAAAGG CC

    Gene models with high sequence identity

    1. AT1G02260.1 [+] show detail - Divalent ion symporter
      E-value: 6e-174; Score: 608.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Divalent ion symporter 1.5e-109
    HMMPanther ARSENITE TRANSPORT PROTEIN 0
    HMMPanther CATION TRANSPORTER RELATED 0

    See the detailed result >

    AT1G02260.1

    Model type
    Protein coding
    Short Description
    Divalent ion symporter
    Computational Description
    Divalent ion symporter; FUNCTIONS IN: citrate transmembrane transporter activity, transporter activity; INVOLVED IN: citrate transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Divalent ion symporter (InterPro:IPR004680); Has 9789 Blast hits to 6672 proteins in 1812 species: Archae - 302; Bacteria - 8135; Metazoa - 259; Fungi - 87; Plants - 203; Viruses - 2; Other Eukaryotes - 801 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR