K28435

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K28435

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K28435

Determination of introduced cDNA(s)

  • J013091C10 - Rice Full-length cDNAs - Original: J013091C10

    full reading [+] show sequence

    Nucleotide sequence: J013091C10 - full reading 
    GGGCGGTTGG GCGTCTCGTC CCGTCTCGTC TCGTCTCCCC ACGACAAGAA 
    GAGAGGCGGT GCGCTTCTCC TCCTCTCCTG TCCTCTCCTC CTCTCGTCGA 
    GCGGCGACGC AGAAGAGTAG TATGGTGCCC GTGGAGATGG AGGTGGACGA 
    CCCCCGCGGC TGGGACTTCG TCGACTGGGT CGGCCCCGAC GCCTCCGCCT 
    CCATCTTCCG CTCCCTCGAC GACCCCGCCG ACATCGTCCG CGCCGCCGCC 
    GTCTCCCGCT CCTGGCGCCG ATTCGTTGTT GAGAACGAAT TCAGCAAGAG 
    CATATGCTTG CGGATATGCC CGGAGATCGC CAATTTCACC AGCGCGGAGG 
    AGGTGAGCAG ATCGCCGCCG CAGCCGCCGC ACGCCGAGTC CAGCCATGGC 
    GTCCAGCGCA AGGCCCTCGA GAGGGACTAC AGGATCTACT CCTACCTCAG 
    CGGCGCCCTC GTCTCCAACA GCCCCTCCAT GGACTGCATC CTGCAATGCA 
    TCGGCGCCTC CAGCACCGAC AACTTCCCCG ACGAGACCAT CGAGAACACG 
    CTCATACCAC ACGATCGGGT CAAGCACCGC CCCTCCTACT GGTCCAGCGG 
    CGGCCACGAC GATCCCGACA CACCAGAGAC CTTGACGTAC AGGCTCAACT 
    GTGATATGTG CATCGTCGAT GAGATCAAGC TGCAGCCATT CAAAGCTTAT 
    TTTCAGTATG GACATCCTAT ATACTCTTCA AAGGCAGTCA GATTCCGGAT 
    GGGCCATTCC AAGCTTCCTC ATGGCTCGGA TTCCTTTGTT ACGGTCGAGG 
    ATGAGAATCT GATGGCAATT GCTGACGAGA ATTATGTGTG GACTTACACT 
    TCACCAGAGT TCCCCATGTT GCAGGAAAAT GTGCTACAAT CCTTCAAGCT 
    TCCGCGCCCA GTCCTTTGCA TTGGTGGTAT AGTGAAGGTT GAACTATTGG 
    GCAGAGTACA AAAACAGGAA GCAGATGATA GATACTACAT ATGTATCTGC 
    CATGCTCAAG TGAGAGGGCG TTCACTTTCT CCAGTTTTCA TGGTTGATAC 
    CTCTGATCCT GCTGGTTATT CAGTCCTCAA GTACTTGCCG GATGCAAAAA 
    TCCTACGCTC CGAGGACGCA ATGCTGGACG ATGGCAGCGA ATCGCTGGAG 
    TGGCACTCAC TTGTTGCTAG GTACAGGCGG ATGAGGCATC TAGCGATAAT 
    GAATGTGCTT CTTGGACCTG AAGAGTTCAT GGATGAAGAT GATATTATAG 
    GTGGCGTGTT AATGGATGAA GATGATTTAG GTGGTATGTT AGAGGACGAC 
    CCTTTTGTGT AGGCTTGCTG CTACAGAACC ACCCGGGTTT TAAACTCTCT 
    GTAGTTAGTT TTCCTTGCAG ACATCTGTGA AACATTCTGC AACTTCGTCG 
    AGAAAATACA GTTGTTCTGA TCTGGAGAGA AGAACAAATG GATTGTTACT 
    GCGCTCAATC TTGATCATGT TTATATGC

    Gene models with high sequence identity

    1. AT4G00755.2 [+] show detail - F-box family protein
      E-value: 1e-66; Score: 251.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G00755.2

    Model type
    Protein coding
    Short Description
    F-box family protein
    Computational Description
    F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); Has 80 Blast hits to 80 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 11; Plants - 57; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR