K29132

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29132

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29132

Determination of introduced cDNA(s)

  • J013153L03 - Rice Full-length cDNAs - Original: J013153L03

    full reading [+] show sequence

    Nucleotide sequence: J013153L03 - full reading 
    GCTTGATTGT TCAACAACAT TCAACGAAGC TTGGTCTCTT CGGGTTGATT 
    TGCTAACGAA ACTTGGTGAA AAACATGCAT TACATGATTT TGTGAGCACG 
    TTGTCGATGA GATGCTCATA TTTACTTGTG AACAAGGAAT ATGTCAAAGA 
    GATCCTTTCT GAAACTCCTG ACCAAAAATC TACTGGGAAT ACAAAACTTA 
    TGTCATCATG CATGGATCTT TTAACGGCAG TATCTAGTTT CTTCCCTTCA 
    CTTTTGTCTG GACTTGAAGA TATCATTGAG CTCCTGAAGG AGGATAATGA 
    ACTACTTAAA GAGGGTATTG CTCATGTTTC TGTCGAAGGC TGGTGGCAAC 
    ATTCGTGAAC AACTAGCTTC ATCAAGTTCC ATTACTCTTC TACTAGAGCG 
    GCTATGTTTG GAAGGAACAC GGAAGCAGGC AAAATACTCT GTTCATGCTT 
    TGGCTGCTAT AACAAAAGAT GATGGCCTGA TGTCTCTATC TGTTCTTTAC 
    AAGAGGCTTG TGGACTTGTT GGAGGAAAAG AAAGTGCATT TGCCATCCAT 
    CTTACAATCC TTGGGGTGTA TAGCTCAGAT AGCAATGCCA ATTTTTGAAA 
    CAAGGGGAGA AGAGATAATA AATTTTATAA CTAAAAAAAT TCTTGACTGC 
    AATGATGATT CGGGCGACGT TTCTGCTCAT AAATCTGAAT GGAGTGATAG 
    TACTCAAAGT TGTTTATTGA AGATTTATGG CATTAAAACT TTGGTGAAGA 
    GCTGTCAACC TTGCAAAGAT GCTCAAGCAC ATCCGGGAAT TGAAAAATTA 
    ATGGGCATCC TTAAGAATAT CCTTACATAT GGTGATATTT CTGCAAATAT 
    GATTTCAAGC ACTATTGATA AGGCCCATTT GAGGCTGGCG GCAGCAAAAG 
    CTGTTCTCCG CTTATCAAGA CAATGGGACC ACAAAGTGCC TGTTGATGTA 
    TTCTATTTGA CTCTCAGGAT TTCACAGGAT GATGTTCCTC AGGTGAGGAA 
    ATTATTTCTT AGTAAAGTAC ATCAATATAT TAAGGAAAGG GCCTTGGATG 
    CAAAATATGC TTGTGCTTTC TTGTTAGCTA TGGATGATTA TCATGCCCCA 
    CAGTATGAAG AGTTTAAGCA CAACATAATT GAGGTTGCGC AGATATGCCA 
    GCAAGTTAAG ATGCGCCAAC TTTCTGTCCA AGCGGAAACA AATGTGCTCA 
    CTGCTTATCC AGAATATATG ATTTCCTATT TGGTTCATGC CCTCTCTCAT 
    GATCCATCAT GTCCTAACAT TGAAGAGCAT GAGGATGTTG AAGCATTTGG 
    TCCAATTTAC TGGCGATTGC ATCTGCTTCT TTTGATCCTC CTGGGGGAAG 
    AGGGTTTGCA GCACAGTGTA CCAGGCATGA AAAAGGAGAG CTTCACAACA 
    ATAGTATCTA TATTTAAAAG TATCAAATAT TCCCAAGATG TGGTTGATGT 
    TAACAAGACC AAGACACTGC ATGCTATTTG TGATCTTGGT ATCCTTATTG 
    GAAAGAAATT ATGTCAAGAG CAGATAAATA TATCAGAAGC TCAAACAGTT 
    TCACTGCCCA GTCAACTTTA TGCGCCAGTT CAGAAGGATC AGAATGAAAA 
    TTCTGTGGAG AGTGATGAGC AGATATGGCC GGGTTGCGAG AATGTGTTGG 
    CCCATTTTGA GGCTCTTATG ACAGCAAAGT CTGCTGAGGT TGAATCTCCC 
    AAGGATAAGA TGCTTATAGA TGAGACTGAT GAATTTGGTA ATGAAGTTCC 
    TCTAGGAAAA ATTGTGAAAA TTTTAAAATC TCAAGGAGCA AAAAAGGCTG 
    GGAGAAAGCA GAAGACAAAA TCTGGTTCAA TAAACATGGA AAAAGATGAT 
    GATGTCTTGG GACTGGTTAG AGAAATAAAC TTGGACAATC AAGAAAATTT 
    GGGGGAATCA GAAAAGAGCA AACCAAAGAA AAAGCGGATG GATGCAAAAG 
    AGAGTAATGA C

    Gene models with high sequence identity

    1. AT5G47690.3 [+] show detail - binding
      E-value: 2e-144; Score: 89.40

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPanther ANDROGEN INDUCED INHIBITOR OF PROLIFERATION ( 4.3e-49

    See the detailed result >

    AT5G47690.3

    Model type
    Protein coding
    Short Description
    binding
    Computational Description
    binding; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, nucleus; EXPRESSED IN: cotyledon, guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT1G77600.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR