K29229

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29229

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29229

Determination of introduced cDNA(s)

J013085F24 - Rice Full-length cDNAs - Original: J013085F24

full reading [+] show sequence

GAACGGAACC CTCGACGGAA CCGCCGCCTC CACTGTCCGG GGGGCGGTAG 
AGATGGCGGC GAAGAGGCTC CTCCTCCTCT CCCGCTGCCG CCTCATTGCC 
CACCGCCCTT CCTGCCACAT CCCCTTCCTG CCGCCCGCGC TCGCCCGCTA 
CCTCGGCTCC CCATCCAGCC CCAACCCCAA CCCCAAGAAT ACTAGTAGCA 
TGGGGACGGC ATCGTCGGGG GAGGAGGAGG AAGACGACGA GGGCAAAGCT 
TTCCCGTGGA GGAGATGGAG GCCTGACGTG GCCTGGCTCC CCAAGGCCCT 
GGAGCCCGCA CTGCAACTCT ACAACCAATA CAAGCCTTTC CTCACTAGTG 
GCCTACTGAC AATATCCCCG CAAGCACCCG CACCTTCAGC GAGATCCTAA 
GCGACCTCCA GCGGAGCAAG GTCAGCATTA AGGACTGGAG TCTCACTGAT 
CTCACCATCG GCCTCTACCT CATCTACCTC AGCCAAGCTT CTGCAAAGGA 
TGCTCAAGCC TTCAAGGGTC TTCATATCTC CTGCAACAAC AAGGTTCAAC 
AACTAATTTA TCACCTTGAG CTTGCAAGAG GTTGCTATAA GGGCAATGCC 
ACTGGCCTTG CACGCCATTC TATGCTTCGC AAGAGGAACG TTCTCAAATT 
CGTCAAGGAC TCCAGTATTC TCAGACCTGG CTATTACATT GCCATTGATC 
CACGCACTAA ATTGGTCATC CTTGGGATTC GTGGGACTCA CACTGTTTAT 
GACCTAGTTA CCGATTTGAT TGCTCTAAGC GATAAGAAGG TATCACCTAA 
AGGTTTCTCG ACACACTTTG GAACATATGA GGCCGCCCGT TGGTACCTTC 
GCCATGAGTT GGGACTTATC AGAAAGTGTT TGGAAAAGCA TAAGGATTAC 
AAGTTGCGCC TGGTAGGGCA CTCCCTTGGA GGTGCTTCAG CCGCGTTGCT 
TGCTATAATG CTAAGGAAGA AGTCAAAGGA AGAGCTTGGA TTTAGTCCTG 
ACGTTATATC AGCTGTTGGA TATGGAACCC CGCCTTGTGT CTCAAGAGAA 
ATTGCTCAAA GTTGTGCAAG CTATGTTTCA ACTGTTGTAC TGCAGGATGA 
TATCATCCCT AGATTAAGTG CAGCTTCACT GGCAAGATTG CGAGCCGAAA 
TACTCAAAAC AGATTGGGTA AGTGTTTTGG AAAAAGAAGA CTGGAAGCAT 
ATAGTGGACA TTGTGACTAA TGCTAAGCTT GTAGTTTCGT CAATTCAAGA 
TGTGGCGCGC AAGCTTGCTG ATTATGCTAA AATTGTCACA GTATCAACTA 
GTTCTGATGC CATCAAAGAT CAAGATCGCC CCCTGAGCAC CAGTGAAGTA 
TTGTCACCGG ATAGTAAAGA GGATGTATTT GTGCCAGAAG ATCTGTTCCT 
TCCTGGGACT CTGTATTACC TCAAGAGGGA CATTGAGGAT ATAAACGGTG 
TAGAAGATGA GTCGTATACA CTCTGGAGAG GTGATGCCGG GGAGAATTTT 
CAGAGGATAC TGTTATCTGG CAATCTGATA TCCGATCACA AATGTGAAAG 
CATATATTAC GCCCTGAGGG ATGTGCTCAA GACTCTGCCG CCCCAGGAAT 
CAGGATGACA AGTAGAAGTT CCTTTTCAAG CTTTTTGCAG GATAATCTCC 
ATCTATTCTG TAGTTTGTCA TCTCGATACA ATAGAGGAAA GCATATTTTT 
GTTGCTCCTT AGTTCTCCCA TGGGTAAAGG CGAAAGTCTG CCGGCTTTGG 
GGGAAATAGA AGAATAGAGC TTGTTGTACA GTTTTGTGTG TGTGTGTGTG 
TGTGTGTGTG TTTGTAAGGG AAAAAACAAG AATAATAGAG AAGAAATGCT 
TAACACT

Gene models with high sequence identity

AT2G42450.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 2e-128; Score: 34.30

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	5.5e-31
HMMPanther	CGI-141 RELATED	1.9e-184
HMMPanther	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	1.9e-184
superfamily	alpha/beta-Hydrolases	1.6e-40
HMMPfam	Lipase, class 3	1.6e-22

See the detailed result >

AT2G42450.1

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR