K29248

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29248

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29248

Determination of introduced cDNA(s)

J023054L06 - Rice Full-length cDNAs - Original: J023054L06

full reading [+] show sequence

GGCGGTTGTT CCCCAGCTAT ACCGCCTCTG ACTCTGAGGA AGGGGCGCAG 
CACCACCGCC CGATGGGGAA GCCCAAGCCC GCCTCCGCCA CAGCCGCTCC 
TCGAGGGCAC AAGAGGCGCC CGAAGAGGAC AAGGCCCTCG GGGAAGGGAG 
GAGGACCCGA GCCGCGCGAG GAGAAGCGCA AGAGGCGAGA GCTCGATGGT 
GTCGGCCTGG CGGAGGAGTC GCCGCCGCCG GGTTCCAGCC TAGGCAAAAT 
CTTAAGTACC GAATCTGGAG CAATAGGCCT AGAGCAGAGT GATGAAGATG 
ACATGGAAGA TGAACACACT GTTCCTGGTG ACGATGAGAC AAATGATATG 
ATAAACAATA AAGATGATGC TTTTGATGAA ATGGAGGCTT CATGTTCATT 
TCATCGCCAT GTTAGTCGCA TCATAACGAA TGAAGAAGTC AATGCATTAC 
TAAAGCAGAA GTGTAAATTT AAATGGGAGG TGCCTGCAGA GGACATTCCA 
AAATCCAAAT GGGTTGGAAC AGGTGAAAAA ATGGAGGGAG CTTATGTTGA 
TCTTATTGGT GGTGTCAAAG GAAAGTTGAG GGATCATTGG CAGAATACCC 
TCTCTGATCA GTTGAATTCT AGATTGAATT TCTTCTCACT TTGTAGTAGC 
TATCGTGACA TAATGCATTG TAATAAGAAG CCATTTTATC TAAAAGGAGG 
TAGCACTGTG GATTCCAGTA CAATGGACTC CTATCTTATG CATGCTTTGA 
ATCATATTAA CAGAACGAGA GAGATTGTTG TAAAAAATGA TGGGAAGCTT 
AGGAGTGACC CTAGCAAAGA TATTTTGGAT GATAACTCAT TCCTCGATCA 
GGGCTTTACA CGTCCAAAGG TTCTTTTCCT GTTACCTCTA AAAAGCATTG 
CGAGGCGTGT TGTGAAGAGG TTGATCCAAC TGTCCCCACT GTCACAAAAG 
GATATCATTG CAAAATTCGA AGGGAAGTTT GGCGAATCAG ATGATGAAGT 
AGAGGAGCCT GTTCAAAGTA ATAAACCTGC AGACTTTGAC CTACTGTTTG 
CTGGAGATAC TGATGATGAG TTCCTTTTTG GGATAAAATA TACAAAAAAA 
TCTATGAATC TGTTCAGCAA CTTCTACTCA TCTGATATCA TTGTTGCATC 
TCCTTTGGCA CTTATAAAGA AAATCAATGG AGTTGATGAC AACGGAAAGG 
AACCTGCCAA GGAAAGGGAT TTTGATTTCC TATCATCAAT TGAAATAGTG 
GTGGTTGATC ACGCAGATGT GATTCTTATG CAGAGTTGGT CACATCTGTA 
TGCTGTGTTT GAACAATTAA ATCAGTTGCC ATCAAAGGAA CATGGAACCA 
ATGTGATGCG TATTAGGCCA TGGTACTTGG ATCAGCATGC ACGTTACTAT 
CGGCAAACAA TACTCTTGAG CTCTTATCTT ACTCCAGAGA TGAATGCTTT 
ATTCAATGGA TTATGCTTGA ATTATGAGGG GAAGGTTAAG CTGGTGACTG 
AATTTAAAGG TGTTCTTTCT AAAATACAGT TTGAAGCACC GCAGGTGTAT 
GAAAGGTTTG ATGCATCTTC TATTACTGAA GTTGATGATG CTCGCTTTGA 
TCATTTCTGC AAGAAGGTGT ACCCAAAGAT TCAGGAGTCA GATGAGGGTC 
GGGTGTTGCT ATTCGTCAGT TCATACTTTG AATATATTAG GATAAGAAAC 
TTCTTAAAAT CTCAGGAAGC ATCGTTTTGT AGAATTGGGG AGACAACATC 
GCAACAAGAT ATATCACGTG CAAGACTCTG GTTTTTTGAG GGCAAGAAAA 
AAATCTTACT TTATAGTGAG AGATCTCATT TCTACCACAG ATACAAGATC 
AGGGGAGCAC ACCATTTGAT TATCTACTCT TTGCCAGGGA GAAAGGAATT 
TTACCCAGAG CTTGTAAACA TGCTCAGTGA ATCAGAAAAC AGGAAATGCA 
CCGTCTTTTT TTCACGTCTG GATCTTCTGA AGTTAGAACG AATTGTTGGG 
ACGTTTGCTG CACAAAGGTT GGTTTCTTCA GATAAGAGCA TTTTCGTGTT 
CCGCTGATTC GGGCGTCATG TTCGGCAGCC TCTCAAATTT TGGAATGCGA 
GATGATTATG TACTGTACCA CAACTCCTTA TTTATTTGTA ATCTAGATTG 
TGGATGCCAT TTTTTGGTAA AGCTCGTGCT GAATGTTTCG CATCAGTATC 
TATTTCAATA TTATGGATGC CATTCTTTGT TAGTTTTTGG AAAACATGCA 
TAGAAACAGT GCCGTCCCTG TGGGAGTGCC ACAAGCATGA CCGCACAGGG 
CCACCAATCT CAAGGGGCCT CAAATAACTT AGTATGTGTC ACAGGATATT 
AGCCCAATAG ATTAAATTAG ATG

Gene models with high sequence identity

AT1G17690.1 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nu...
E-value: 2e-175; Score: 613.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Protein of unknown function DUF1253	2.7e-109
HMMPfam	Protein of unknown function DUF1253	5.9e-152

See the detailed result >

AT1G17690.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Digestive organ expansion factor, predicted (InterPro:IPR010678); Has 25006 Blast hits to 13379 proteins in 904 species: Archae - 102; Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants - 1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI BLink).
Link: InterPro Scan - TAIR