K29338

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29338

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29338

Determination of introduced cDNA(s)

  • J023091N11 - Rice Full-length cDNAs - Original: J023091N11

    full reading [+] show sequence

    Nucleotide sequence: J023091N11 - full reading
    TGGGAGAACA GAACAAAGGT GGAGACTGCG ATTCACTTCC ACTCCCTTCC 
    CCACTGCCTT CCTCCTCTCA CTCTCACTCC CCCTGCGACC GCCGCCGAGA
    GGCCATGGCG GAGCAAGCTC CACTGGCGCC GATGCCTCGA GTCAAGCTCG
    GCACCCGGGG CCTAGAGGTG TCCAAGCTGG GGTTCGGGTG CATGGGGCTC
    ACGGGCGCGT ACAACTCGCC GCTCGACGAC GACGCCGGCG CCGCCGTCAT
    CGCGCACGCC TTCCGCCGCG GCGTCACCTT CTTCGGCACC TCCGACGTCT
    ACGGCCCCCT CGCCAACGAG ATCCTCCTCG GCAAGGCGCT GAAGCAGCTG
    CCGCGGGAGC AGGTGCAGGT GGCCACCAAG TTCGGGATTC GGCGGGGCGC
    CGACGGCGTG CGCGCCGTGT GCGGCCGGCC GGAGTACGTG CGCGCCTGCT
    GCGAGGCCAG CCTCGGCCGC CTCGGCGTCG ACTACATCGA CCTCTACTAC
    CAGCACCGCG TCGACACCAC CATCCCCATC GAGGACACGA TTGGTGAGCT
    CAAGAAATTG GTGGAGGAGG GGAAGGTGAG GTACATTGGG CTATCGGAGG
    CGAGCCCTGA CACCATCAGG CGAGCTCATG CCGTGCACCC AATCACTGCA
    GTTCAGATGG AGTGGTCTCT CTGGGCTCGT GACATTGAAC CCGAAATTGT
    GCCGCTCTGC AGGGAGTTGG GCATTGGAAT TGTTCCCTAC AGCCCTATCG
    CCCGCGGGTT TTTCGGAGGG AGAGGAGTGA CAGAACAATT GTCTGCTGAA
    TCTAATTTGC AAGGACATCC ACGATTTTCT GCTGAAAATT TGGAGAAGAA
    TAAACAGCTT TATCTGAAAA CGGAAGAGCT GGCCAAGAAG CACCAGTGCA
    GCCCTGCTCA GCTAGCTTTA GCTTGGGTTC TTCATCAAGG GGATGATGTG
    GTCCCAATAC CAGGAACAAC CAAGATAAAA AACCTAGATG CCAACATTGA
    CTCCTTAAAG GTGAACCTCA CGGATGATGA CCTGAAAGAG ATCTCTAGCC
    AGGTACGCGA AGAAGATGTC GCTGGTGGAA GACAGTATAC CTCATTTGCA
    CATTACACCT GGAAGTATGC TGACACGCCA AAGAAGTAAA GCTAAAAAAA
    TATTAGTATA TCAAAGATAT TGCCTGATTG CTATTCTCCC TGCGTATGTG
    CTGGATGGTG TTAAATGTAT GCCTTGTGAA TGCTCTCTGC GGTTCTAATA
    ATGTACTGCC AATAACAAAT TACTGCACTT CCACTCGCCT TTGAGAGCTT
    CACGAAACAT ATAAAACTTG CTTAAGC

    Gene models with high sequence identity

    1. AT1G60690.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 2e-106; Score: 382.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Aldo/keto reductase 2.5e-75
    HMMPanther ALDO/KETO REDUCTASE 1.7e-109
    HMMPanther Aldo/keto reductase 1.7e-109
    Gene3D Aldo/keto reductase 5.6e-94
    superfamily Aldo/keto reductase 1.2e-102

    See the detailed result >

    AT1G60690.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60710.1); Has 30326 Blast hits to 30300 proteins in 2568 species: Archae - 659; Bacteria - 20203; Metazoa - 1608; Fungi - 2287; Plants - 1265; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR