K29419

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29419

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
rosette leaf (PO:0000014)
  • increased length (PATO:0000573)
    (Rosette leaf::Shape::long)
  • epinastic (PATO:0000945)
    (Rosette leaf::Shape::epinastic)
petal (PO:0009032)
  • abnormal (PATO:0000460)
    (Flower::Shape::petal)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29419

Determination of introduced cDNA(s)

  • J033105E18 - Rice Full-length cDNAs - Original: J033105E18

    full reading [+] show sequence

    Nucleotide sequence: J033105E18 - full reading
    GGCAAGCAAG TCCTTCTGCT AGCTGCGAGC CTCACGTGCC CATTCACTCT 
    CTTTATTTAT TGCTGATTCC CGATCGATCG ATCGATCGAT CGATCAGCAG
    GCAATAGTTA ATCGATCTCA ACAACTACCC ATCAGTTATT CAATACAATA
    CAGCCATTCA GACAGAAGCA AGGTCTATCG AGTCAGAGAG ATCGACATCT
    CGGCGAGCGA GATCGGTGAA TTGATGGGTG ATCATGGACG CCGGCGGCAG
    GCGGCGGCGC CGCTGCTGGA GAAGAAGGGC AGCACCGGCA CCGGCGTGGA
    CGATGGGTAC TGCATTGAGG GGTGCCCCGG GTGCGTCGTC GACCGGCGGA
    AGGCCGCGAG CTACGGCATC CCCTACGGGA GCTTCCTCTT TGTCTGGATT
    GTCACGCTCT GCACAGCTTT ACCAATATCA TCATTGTTCC CCTTCTTGTA
    CTTCATGATA AGAGACTTGC ATGTTGCAAA AAGGACAGAA GATATTGGGT
    TCTATGCCGG CTTTGTGGGT GCTTCGTTTA TGTTCGGTCG ATGTTTGACT
    TCAACTGTTT GGGGAATAGC AGCAGATCGT ATTGGGAGGA AACCAGTTGT
    TGTGTTTGGC ATTTTTGCGG TGGTCATATT TAATACGCTA TTTGGGCTTA
    GTTTCACCTA TTGGATGGCA ATAGCTACAA GATTCCTTCT TGGTGCTTTA
    AATGGTTTAC TTGGGCCAAT AAAGGCCTAT GCAATTGAAG TTTGCCGACC
    TGAACATGAA GCTCTTGCAT AGTCACTTGT TAGCACAGCA TGGGGAATAG
    GTCTTATCAT TGGTCCAGCT ATTGGAGGCT ACCTTTCACA GCCTGCAGAG
    AAATTTCCCA ATGTCTTTTC CCCTGACTCA CTGTTTGCAA GGTTCCCATA
    TTTCTTACCC TGCTTGTGCA TATCAGTCTT TGCTGCTGTT GTTCTCATAG
    GCTGCATATG GATGCCAGAG ACATTACACA AGCATAAAGC TGATGCAAGT
    AGATCCCAAA CTGTTGAAGC TTTGGAGAGC CATTTGATTG ATCCAAAAGA
    AAAGGCTGAC CAAAATGGTA GTTTGGACTG CAAGAAGAGC TTATTGAGAA
    ATTGGCCCTT GATGTCCTCC ATAATTCTCT ATTGTGTCTT CTCCTTTCAT
    GATATGGCTT ATACAGAGAT ATTCTCTCTA TGGGCAGAAA GTGACAGGAA
    GTACGGTGGG CTGAGTTTGT CATCTGAAGA TGTGGGTCAA GTGCTTGCAA
    TCACAGGTGT CAGTCTTCTT GTGTATCAAC TCTTCATTTA TCCTCGTATC
    AATAAGGTTA TAGGGCATAT TAAGGCTTCT CGAATTGCAG CTATTCTGTG
    CATACCTATT CTCTTTGCAT ATCCTTATAT GACATACCTA TCGGGACCTG
    GATTAACGAT CATACTGAAC ATTGCGTCAG TTATAAAAAA ATAATCTTGG
    TGTTACCATC ATTACAGGCT GTTTCATCCT ACAAAATAAT GCTGTGCCTC
    AAGACCAACG AGGGGCTGCT AATGGCTTGG CAATGACAGG AATGTCCTTT
    TTTAAGGCAG TGGCTCCAGC AGGGGCGGGC ATTGTGTTCT CGTGGGCACA
    AAAACGCCAG CATGCTTCCT TCCTTCCAGG TGATCAGATG GTGTTCTTTC
    TTTTGAATCT CTTCGAGTTG CTTGGACTTA TCCTCACTTT CAAACCCTTT
    CTGGCCGTAC CAGAGCAGCA CGATACAAAT TAGACTGTTC AGGTATACTA
    CAGATCTAGA TTCTTCAGAA CTTCAGATGT TGGCAATTTC ATGAGCCCTG
    CAGCCCGCTG TGTGAAGCAA AGGTATAACA TATGCTCATC TGGATCCCCC
    AGGAGCAATA GATAGAAGCG AGAGTACTAC TCTGTCCCAA AGAATCAAAG
    CTAGGGTTTG ATTATTTTTG GGACGGAGGG GTAGGTGCCA GATATGCAAT
    TGCAGCATTT CAGCGAAAGG AATATATATA GTTGGGGTAA ATGGTGGCCA
    CTGATGGCTA GGTTTTTCAT GGCCAGCCAG CATGTATACC GAGTAGCATT
    CTACCAGTAT AATGAATATA GTACTATGTA CATTGTAACT AGTAAAACTC
    TGTAAGTGAC ATCAGCTTGA GAATGAAATT ATTGCTGGAA TCGAGATCAG
    TACATTGCT

    Gene models with high sequence identity

    1. AT3G43790.1 [+] show detail - zinc induced facilitator-like 2
      E-value: 6e-136; Score: 102.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Major facilitator superfamily, general substrate transporter 9.9e-21
    superfamily Major facilitator superfamily, general substrate transporter 1e-11
    ProfileScan MFS 15.163
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 1.4e-23
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 1.4e-23
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 1.3e-53
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 1.3e-53
    HMMPanther MAJOR FACILITATOR SUPERFAMILY ANTIPORTER 2e-54
    HMMPanther MAJOR FACILITATOR SUPERFAMILY MEMBER 2e-54
    HMMPfam Major facilitator superfamily MFS-1 2.4e-14
    HMMPfam Major facilitator superfamily MFS-1 4e-10

    See the detailed result >

    AT3G43790.1

    Model type
    Protein coding
    Short Description
    zinc induced facilitator-like 2
    Computational Description
    zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 22616 Blast hits to 21614 proteins in 2597 species: Archae - 368; Bacteria - 16981; Metazoa - 1046; Fungi - 2343; Plants - 376; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR