K29507

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29507

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29507

Determination of introduced cDNA(s)

  • J013130B16 - Rice Full-length cDNAs - Original: J013130B16

    full reading [+] show sequence

    Nucleotide sequence: J013130B16 - full reading 
    GAGCGTCCAC TTCCACCGAA GTACCGAACA CCCCGTCCCC ATCATCACCT 
    CACCATGGCG GCAGAGGGAG AGGAGGCGAG GAGCCCGCAC GTCGTGCTCT 
    TCCCCTTCCT CGCGCACGGC CACATCCCGG CCTTCCTCCG CCTCGCCGGC 
    CACCTCCAGA CGCTCCGCCC GGGCCTCGCC GTCACGCTCG TCTCCACCCC 
    ACGCCTCCTC GGCTCCCTCT CCCTCCCGGC CACCTCCCCT CCGATCCGGC 
    TCCACGCGCT CCCCTTCGCG CCCGCCGACC ACGGTCTGCC CGACGGCGCC 
    GAGTCCCTCG CCGACCTCCA CGTCCACCAG TTCATCACCC TCTTCCGGGC 
    CTCCGAGTCC CTCCGCCCGG CCTTCGATGG CTTCGTCGCT GGCATCCGGC 
    CCCCCGTCTG CGTCATCGCC GACTCCTTCT TCGCGTGGAC GGCCGACGTC 
    GCGCGCGCGC GGGGCGCGTC CCACGCCGTG TTCCTCCCCG GAGGCGCCTT 
    CGGCCACGCC GTCTTCTTCT CCGTGTGGGA GCACCTCCCG CACACCCTCA 
    CGGCCGGCGG CGACGAGTTC CCGCTGCTGC CCGACTTCCC CGACGTCGTC 
    CTCCACCGCA CCCAGATCCC GCAGTACATG CTCGCCGCGA CGGGGGCGGA 
    CCCCTGGACG GCCTTCTTCC GGCGGGTCAT CCCGTGCTGC CGCAAGACCG 
    ACGCCGTGCT CGTCAACACC ATCCAGGAAC TGGAGACCTC CGGGCTAGAC 
    ATGCTCAGAG CGAGCTTCGG CGTCCAGACA TGGGCGATCG GGCCGATCCT 
    CGCGGCGCCG GATCCTTCGA AATCGCAGGA CGACGACGAC ACCAGCATCA 
    TCCGGTGGCT GGACGCGCAC CCGCGGCGCT CGGTGCTGTA CATCTCGTTC 
    GGGTCGCAGA ACAGCATCAG CATCCGTCAG ATGGCGGAGC TGGCGCTGGG 
    GCTGGAGGCG AGCGGGCGGC CGTTCGTCTG GGCCGTCCGG CCGCCGGTGG 
    GGTTCGACCC CAAGGACGGA TTCGATCCCG GGTGGCTCCC CGCCGGATTC 
    GAGGACCGGA TGGCGCGCGC AGGCAGGGGG CTGGTGGTGC GCGGGTGGGC 
    GCCGCAGGCG CGGATCCTGG CGCACCCGTC CACGGGCGCG TTCCTGACAC 
    ACTGCGGGTG GAACTCCATC CTCGAGAGCC TCCGCCACGG CGTGCCGCTG 
    CTCGGGTGGC CGGTGGGGGC CGAGCAGTTC TTCAACGCGA TGGTGGTGGT 
    GGAGTGGGGG GTGTGCGTGG AGGTGGCGCG CGGGAACCTG GAGAGCTCGG 
    CGGTGGAGAG TGGGGAGGTG GCCGAGGCCG TGGGGGCGGT GATGGGGGAG 
    ACGGAGAAGG GCGAGGCGAT GAGGAGGAAG GCGGGGGAGA TCGCGCGCGC 
    GATGGCGGCG GCGTGGGAGG GTCCGGCCGG GTCGTCGGCG GCGAGCTTGG 
    AACGGTTTCT CAGATGCGTT GAGGCATCGG CGCTCCGAGA TTCGTGCTTG 
    GGTGCTTCGT GATTGGTGCA GCGCGAAAAC CACCCGTGTA AATGTTGATG 
    TGAATTCTCT TTCTAATTTC TGATTTCTCT CGGTTTAGAT ATTCTGTTAG 
    ACGTGTATAT TTATCTCGGT TTGGACGTAG TATGTTCATA GTAAGAATCA 
    CAACTC

    Gene models with high sequence identity

    1. AT5G12890.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 4e-89; Score: 325.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UDP-GLUCOSYLTRANSFERASE 1.9e-111
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 1.9e-111
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 8.9e-54
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    Gene3D no description 7.2e-20
    FPrintScan PRICHEXTENSN 1.9e-11
    FPrintScan PRICHEXTENSN 1.9e-11
    FPrintScan PRICHEXTENSN 1.9e-11
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 3.5e-24

    See the detailed result >

    AT5G12890.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Computational Description
    UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G36780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR