K29601

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29601

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29601

Determination of introduced cDNA(s)

  • J013154B18 - Rice Full-length cDNAs - Original: J013154B18

    full reading [+] show sequence

    Nucleotide sequence: J013154B18 - full reading 
    GAGATTTCCC CCCGTTCTCG GGCCATTGCC TCGCGGTGCG ACGAGCCACC 
    GGGAATCCGG GATCTCCGCC GTTCGGGGAC CGAGGGGGAG AATAGGGGAG 
    AACGGAGAAG GTCTGCGGGC TCAAACTCCT ACCCAGGCAG ATGACGCTCC 
    ATGGAGTCAT GGCGCATTTG AGGTATGCCG GAAGGTTTTT TTTACCAAGC 
    GACCTGGGAA TTGAAGCAGC GGAGAAGAGG CTCCAGTGCG GCAGGCTGTC 
    CGAAAGGGCT TGGAACCTGG TAGAGGTACG ATTTCTTCAG GAGATAACCT 
    GGGGTGGTGG CACGGGACTC TGCCGTTTCA CTGCTTCAAG CTCAAGGTGG 
    CTGGCGGCAT CTGGCAGCTG CACCAGTGTT GTTCATGGCG GAGGTGGTGT 
    TGGCAGGCTT ATGTTTGGCA GCAACACCAA TCTGTGTGAA GCTCCTCATC 
    AACGCTTCGA CGTACCTTGG CGTGGACATG ACACATGAGC TCCATGAACT 
    GGAGACCACC ATCATACCAC AGTTCGAGCT GGTGATCGAA GCAGCTGAGA 
    AAGGAAACCA CAGAGTCAAG CTGGACAGAT GGCTCCAGGA GCTCAAACAA 
    GCCTTCTACA ATGCTGAGGA CCTGCTGGAC GAGCATGAGT ACAACATCCT 
    TAAGTGCAAA GCAAAAAACA AGGATTCTCT AGCGAAAGAT TCCACCCAGG 
    TGCATGGCTC TTCCATCAGC AATATTCTGG AGCAGCCTAT GCATGCTGTG 
    TCCAGTAGGA TGTCCAATCT GTGGCCAGAG GACAGAAAGA TACTTTGCCA 
    GCTGAATGAA CTGAAGACCA TCCTGGAGAA AGCCAAGGAG TTCCGTGAGC 
    TGATTCACAT ACCTGCTGGT AATAGTCTTG AAGGTCCCAG TGTCCCAACA 
    ACCATTGTCC CTGTAGTGAC ATCGCTGTTG CCGCCAAGAG TATTTGGTCG 
    TGACAAGGAT CGTGATCGCA TAATACATCT TCTTACTAAG CCAATGGCTA 
    CTGTTTCTAG CTCAGTCGGC TACTCTGGTT TGGCCATTAT TGCACATGGA 
    GGAGCAGGAA AATCCACATT GGCACAATAT GTTTACAATG ACAAGACGGT 
    GCAAGAACAT TTTGATGTCA GGATGTGGGT CTGCATCTCA CGCAAACTTG 
    ATGTCCATCG TCATACACGG GAGATTATCG AGTCCGCAGA AAATGGACAG 
    TGCCCACGTG TGGACAATCT TGACACCCTC CAGTGCAAAT TGAGGGACAT 
    ACTTCAAAAA TCAGAGAAAT TCCTGCTTGT GTTGGATGAT GTCTGGTTTG 
    ATGAATTCAA CAATGAAACA GAATGGGACC AGCTGCTTGA TCCTCTAGTT 
    TCTCAGAAAG AAGGGAGCAG AGTTCTGGTG ACTTCCAGAC AAGATGTACT 
    TCCAGCAGCA CTTCGCTGCA AGGATGTCGT TCGTTTGGAA AACATGGAAG 
    ACACTGAGTT CTTGGCTCTC TTCAAACACC ATGCGTTCTC TGGAACAGAA 
    ATAAAAAATC CACAGCTGCG TGGAAGACTA GAGAAGATTG CAGAGAAGAT 
    TGTTAATAGG CTTGGACATT CTCCTTTGGC AGCTAGTACC GTGGGTTCCC 
    AGTTGAGCAG GAATAAGGAT ATCAACTTAT GGAAAAGTGC TCTGAATATT 
    GAAAATTTAA GCGAGCCCAT GAAAGCTCTA TTGTGGAGTT ATAATAAGTT 
    AGATTCACGT TTGCAGAGGT GTTTTCTCTA CTGCAGCTTA TTTCCAAAAG 
    GTCATAAGTA TAAAATCAAA GAGATGGTTG ACCTTTGGGT AGCAGAGGGA 
    TTAATTGATT CACACAGCCC CGGGGACAAG AGAATTGAAG ATGTTGGTAG 
    GGATTACTTC AATGAGATGG TGTCTGGGTC TTTCTTTCAA CCAGTTTCTG 
    AAAGATATAT GGGTACATGG TACATTATGC ATGATCTGCT TCATGATTTG 
    GCAGAGTCAC TGACTAAAGA AGACTGCTTC AGATTAGAAG ATGATGGGGT 
    GAAAGAGATA CCAACCACTG TTCGACATCT ATCTGTACGT GTTGAGAGTA 
    TGAAATTCCA TAAGCAAAGT ATCTGCAAGC TTCGTTATTT ACGCACAGTT 
    ATCTGCATTG ACCCACTCAT GGATAATGGA GATGATGTTT TCAATCAGGT 
    ACTGAAGAAT CTGAAGAGGT TACGTGTACT ATATTTGTCA TTTTACAACA 
    GTAGCCGGTT GCCTGAATGT ATTGGTGAGC TGAAGCACCT TCGGTATTTG 
    AATATCATCA AAACATTGAT TTCTGAATTG CCAAGATCAT TATGTACTCT 
    TTACCAGTTA CAGTTACTTC AGTTAAACAA AAAGGTGAAG TGTTTGCCTG 
    ACAAGCTGTG CAATTTAAGT AAGTTACGAC GTCTTGAAGC ATTTGAGGAC 
    AGAATAGATG AATTGATAAA TGCTGCTCTG CCTCAAATTC CTTACATAGG 
    CAAGCTAACT TTGCTGCAAC ATATTGATGG ATTTTTCGTG CAAAAGAAGA 
    AGGGATATGA GTTGCATCAA CTGGGGAACA TGAATGAGCT CGGTGGTAAT 
    TTGCGTGTGA TGAATCTTGA AAATGTTAGT GGAAAGGATG AAGCCTCAGA 
    GTCGAAGCTG CATCAGAAAA CTCATCTTAG AGGTTTGCAT CTCTCCTGGA 
    ATGATGTGTA TGGCATGGAT GTTTCACATT TGGAGATTCT AGAAGGCCTG 
    AGGCCGCCAT CTCAATTGGA GGACCTTACA ATTGAAGGTT ACAAATCCGC 
    CATGTACCCA AGCTGGTTAC TTGATGGCTC CTATTTTGAG AATCTAGAGT 
    CTTTTACGCT TGCTAATTGC TGTGGGATAG GAAGCCTACC ACCCAATACC 
    GAGATCTTTA GGCACTGCCT GACACTTACC CTTGAGAATG TCCCGAATAT 
    GAAGACACTA TCTTTTCTTC CAGAAGGTCT CACAAGCCTA TCAATTGTGG 
    GGTGCCCACT GCTTGTGTTT ACTACTAATA ACGATGAACT AGAACACCAT 
    GATTATAGGG AGAGCATCAC GAGGGCAAGC AACCTGGAAA CACAACTTGT 
    TTTGATTTGG GAAGCAGATT CCGATTCAGA TATTAGGAGA ACATTGTTGT 
    CCGAACACTC ATCCATGAAG AAGCTGACAG AATTGATGGA TACTGATATT 
    TCAGGAAATC TTCAAACCAT TGAAAGCGCT CTAAAAATAG AGAGAGATGA 
    AGCCTTGGTT AAAGAAGATA TCATCAAAGT ATGGCTCTGT TGCCATGAGG 
    AGAGGATGAG ATTCATTTAT TCAAGGAAGG TTGGGTTGCC GTTTGTTCCA 
    CCATCAGGAC TATGCGAACT CAATCTTTTC TCCTGTAGTA TTACAGATGG 
    TGCTTTAGCT ATTTGCCTTG GTGGACTGAC TTCGCTTAGA AATTTGTTCT 
    TAACCGAAAT TATGGCTTTA ACTACGCTTC CACCGGAAGA GGTCCTCCAA 
    CATTTGGGGA ATCTTAGATA CTTGGTCATT CGTTCCTGCT GGTGTCTCAG 
    ATCGTTCGGG GGCTTGCGAT CTGCTACCTC TCTTTCAGAA ATAAGATTAT 
    TTTCCTGTCC TTCTTTACAG TTGGCACGTG GCGCAGAATT TATGCAAATG 
    TCCCTTGAGA AGCTATGTGT ATACAACTGT GTGCTTTCAG CTGACTTCTT 
    CTGTGGTGAC TGGCCACATC TGGATGATAT TCTCTTATCT GGGTGCAGAA 
    GCTCGTCGTC CTTGCATGTT GGTGATCTTA CCTCCCTCGA ATCATTCTCA 
    CTATATCATT TTCCAGATTT ATGCACGCTG GAAGGTTTGT CTTCCCTGCA 
    GCTTCACCAC GTGCATTTGA TAGATGTTCC AAAGCTTACT ACCGAGAGCA 
    TCTCACAGTT TCGCGTCCAG CGTTCGCTCT ATATTAGCAG TTCTGTTATG 
    CTCAACCACA TGCTCTCTGC TGAAGGTTTC GTTGTTCCAG AGTTTCTCTC 
    TCTTGAAAGC TGCAAGGAGC CATCCGTTTC ATTCGAAGAA TCTGCAAACT 
    TCACATCCGT CAAGTGCCTG AGGTTATGTA ATTGTGAAAT GAGGTCACCA 
    CCAGGAAATA TGAAGTGCCT ATCCAGTCTA ACGAAACTCG ATATCTATGA 
    TTGCCCCAAC ATATCATCTA TACCAGATCT GCCGTCCTCC CTCCAGCATA 
    TATGTATATG GGGTTGTGAG CTCTTGAAGG AGAGCTGCAG AGCACCTGAA 
    GGAGAAAGCT GGCCAAAGAT TGCGCATATC CGCTGGAAGG AATTCAGATG 
    AATTGTGCTT CAGAATCACA ACTAGAGAGA AACGGAAAGG TGAAGGTTAC 
    ATCAATGCAT TGTCAGAAGT ATTTTCTTTT CTGTATTATT TATTTCGTTA 
    ACCCATGATC ATGCAAACAC ATTATTTACT TCAATGTTTC CTTGTTTATT 
    TATTTTGAAC AG

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 4e-92; Score: 337.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    superfamily L domain-like 4e-30
    superfamily L domain-like 1.4e-27
    superfamily P-loop containing nucleoside triphosphate hyd 0.00000000024
    FPrintScan Disease resistance protein 0.0000000015
    FPrintScan Disease resistance protein 0.0000000015
    FPrintScan Disease resistance protein 0.0000000015
    FPrintScan Disease resistance protein 0.0000000015
    Gene3D no description 0.0000037
    Gene3D no description 0.000011
    HMMPfam NB-ARC 5.3e-52
    HMMPanther LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2, LRR 0.00012
    HMMPanther LEUCINE-RICH REPEAT-CONTAINING PROTEIN 0.00012

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR