K29605

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29605

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29605

Determination of introduced cDNA(s)

  • J023049O12 - Rice Full-length cDNAs - Original: J023049O12

    full reading [+] show sequence

    Nucleotide sequence: J023049O12 - full reading 
    GAGGCGGCAA GTGAACAAAC CAGAGTTCAA AAATTTCCCA AAAAAAAATA 
    AAAAATAAAA ATCCGTCTCT TCCGCCTCCG ACGATTCGCT GCTCGCCGGC 
    CTCCGCCGCG GGCGCCGCGA AGCCTTCCGG TGAACTCCGG CGACGGGCGG 
    GTGTGGGGAT TCGCGGCCTT GAGGGTTCGT GCTCGCCTCC GACTCCTCGC 
    TCGCTCTCTC TCTCTCTCCG CGGTTGCGGA GGTCGGGGGT CTTGCCGGCG 
    GTGGGTGGGC TAGGGTTTCG CCGCCTCGGG TTCTCCGGGG TCCAGGAGAT 
    CTAGGGTTGT GAGATCAGGA GTAGGATTAC AAAATTGCAC ACCAGATAGT 
    TTTGCTGCTG AATATCAGAA AACCATGAAA CCTCTTCAGC AGCGCTGTAA 
    ACCAACTGAT ACAGGAACGG CGGCAAAACT TGGTGGCAGT ACGATGCAAA 
    GCCTGAAACC TGGAAAATAT ATCAACAAAT CATCAGGCAA TGCTAGCACA 
    AAATACAGAA GAGCTGGTGC CTCATCACCT CAATTGTATA CTGAAAAACA 
    AAGTGCACCA AAGGATGGTA GCTTTATGGA AGCACTGTTC CATGATTCTA 
    AGAATGTGTC TGCTCGACCA CCCTGCCATT CTGGAAAGAT CGCACTTCAA 
    CTGTTCCCAA TAGATGAGGA GTTTCAGAAG TCCCTGCAGC AGAAAAACCA 
    CAATCCTTAC CTGGAATTGA CTGTGGCTCC TCGAAAGAAA ATATCCTCAG 
    TTCTGCAGCA TCTCAACACA AAATGGGGCA ATTCTCAGTG TGCAAGAGGT 
    GAACTCATGC TCTTCCCTGA CGGTACTAGG CTTGATAACA TAAATGGCAG 
    TGAGAGATGG ACTCGTAGTG ATTCTTGCAC AGCAGCTGAT GTGCATGTTG 
    CTGTTGGCAG CCCTTCGACA TTTCGCTTAA GATATGGTTG GTTTCCACCC 
    AATTTTGGGG AACAAAACAG TGGAGTATCT TTAGGATTAG TGCACTCTGC 
    AGGCAATATA ATCGACAACG AGCCTTTAGA TCCTGTTGTC AGGGAACAGA 
    AACAGATGAC TGCTTTGAGT GAATTCCCGA GTAACTTTGC TGCACCGTCC 
    ACTGAGGCCA ACACAGTAAA GACTATGAAA CAGGATAATC AAAGCAAAGA 
    GACACCACTT TCATGGATTG ACTGCATATC TAATATAAGT TTTGGAGCAC 
    TATTAGCTGA AGCTGCGCCT TCTCAAGACA GCAAGCAGTT ACTTCCACAA 
    AACAACTCAA GTCTCCAACA GATACCTCTT ACCGCTGATT CATTTGATGC 
    TGCTATTGCT TCCCTGATTG CTCGGCAACA AGCAAGTAGC CAGCCGAAGG 
    TGTCAACTCC ATCCCTTTGG GATGCAGAAG AAACGTGCCA TGCATTTCCT 
    TCCCAGAATC GAATTTCACG CAGGACACCT GGTACAACTC CTAGCAGTTG 
    TGGTGCTAGT ACCTTGTCTG TCCTAGGCAC AATTCTGGAA TCTGGTACAG 
    ACGGTGAGAA GCAATGTTCT ACTGAAGATA GAAGAGAGGA ACCGAACCCT 
    CAGGCATCAC TCTTGGCCAA TGATGACAAT AATGTGAAGC CAGACATCCC 
    AGTGTCTGAA TCTACTGGGG AGCCAAGACT GGGAGCATCT TGTTTTCAGT 
    CTGAATCGAC TGGGGAGCCA GAAGTCGGAG CATCTTGTTC AAGACTTTTG 
    AGTGGCACCG ACAGTTTAAG TGTGAGCGAT TTACTTGCAA ACAGCTTGGA 
    TGCATTCCAG AAATTCTCTG TTTTCTGAAG CGTAGCTTTT ATATGGAAGA 
    ACTGAAATTG CACATCTTGT AAAGATCAGG AACTAGGGTG AAACGTCGTA 
    TGTGTTTCCC AGTTCATTAG GAGATCTTTT TTTTTTTGAG GGGGCTTGCT 
    GATCTGAAGC CTCTTGTGTA GTATTTTTCC TTAAATATTT AGCGAAAAGC 
    ACCACCTTTG TCATGTAAAC CTCTGCTAAT TGCTACTAAC AATAGCCATA 
    TTCATCTAAA ATAATCAATG ATAATATTGA TTGTC

    Gene models with high sequence identity

    1. AT2G36960.3 [+] show detail - TSL-kinase interacting protein 1
      E-value: 1e-43; Score: 175.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36960.3

    Model type
    Protein coding
    Short Description
    TSL-kinase interacting protein 1
    Curator Summary
    Arabidopsis thaliana myb/SANT domain protein
    Computational Description
    TSL-kinase interacting protein 1 (TKI1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), SANT, eukarya (InterPro:IPR017884); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39380.1).
    Link
    InterPro Scan - TAIR