K30025

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30025

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30025

Determination of introduced cDNA(s)

  • J013075K03 - Rice Full-length cDNAs - Original: J013075K03

    full reading [+] show sequence

    Nucleotide sequence: J013075K03 - full reading
    GGCGCACGGA GAAGTCCCGA GACCGGCGCC GCCAGGACCG CCACCCACCT 
    CTGCCTCCGC CCTCCAAACC CTAGCTCCGG CGATGGCCCC GAAGCGCCCC
    ACTCCGCCGC CGCCGCCGCC TCCGGTTGCC TCCTCAGAGG AAACCGCCTC
    CGGCTCGGAC TCGGACGAGT CGGAGGAGGA GGAGGAGGAG AGTCCCCTTG
    CTCAGCCCGC ACCCGTGGTC TCTAACAAGG GCGCGGAGTC CGATTCTTCC
    GGGGAGGAGG AATCGGAGGA GGAGGAGGAG GAGGACTTGG TGCGCTCCTC
    CGCTACCAAG AGCAGGGATC CACCGCAGGA GAATCGCGAG GAGGATGATT
    CGTCCGATGA GGAAGAGGAC GAGTCGTCCG AATCCGAGAA GGCGGAGGCG
    CCGCCGCCGC CGCCGCCGAA TCCGGCTCCG AAGCAGGGGG CGGAGGGGAA
    TGGCCCGAAG GTCTCGTCGC CCAAGAGGCA GGCCTTCCAC CGCATCTGGT
    CGACCGAGGA CGAGGTGCGC ATCCTCGAGG CGCTCGCGGC GCACCGCCGG
    GAGCACGGGT CGCTGCCACA GACCGACGCG CTCATCGCCA CCCTCGCCGG
    CAGCCTCGAC AACACTGGCT ACGGCCGCAA GGAGCTCCAG GGGAAGGTCA
    GCACTCTCAA GCGCCGTTAC GAATCCACCG CTAAGAAGAA GGGCGATCTC
    CCAAGCAAGG GCCATGACCG CCGGCTCTAT GACCTCTCCA AGAGCGTCTG
    GGGCAGCGAG GCGGCAGCGG CGGCGGTGAA CGGCACCACC ACCGCGCCGA
    GGGAGTTCGG CGAGATGTGC GAGCTGTACC CGCACCTCGC TGAGGAGGTC
    AAGTTGCTGG AGGCGGCACA CCCTGGCTTG TTCAAGAGGG ACTTCGGGAA
    GCTCGATGAC GACAAGGCGC ATGCGCTGGA CATGAAGATC AAGAAGCAGA
    GGATTGCCGA GATTTCGGTG GTGCTGCGCC GTGGCGACCT GACCAAGGAG
    GTGACCAAGG TGCTCGCTGA GCTGGTCGAG TGACTAGGTG AGCTGAACTG
    AAGTGAACAG TAGTAGCTCG GCGTTCCTTA CCATGGCATA AGAAAGTGTA
    CCTGGTCATT ACCTGCAAAC TATATCGTGA ACAGGCATTA CCTGCAAAAT
    TTTGCTTCTT AGTGATGGAG TTGGATGTTC TATGTTCT

    Gene models with high sequence identity

    1. AT1G44810.1 [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
      E-value: 0.000001; Score: 51.60

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF573 0.00000000000039
    Coil coiled-coil 0

    See the detailed result >

    AT1G44810.1

    Model type
    Protein coding
    Short Description
    DNA-binding storekeeper protein-related transcriptional regulator
    Computational Description
    DNA-binding storekeeper protein-related transcriptional regulator; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00250.1); Has 1180 Blast hits to 828 proteins in 148 species: Archae - 2; Bacteria - 95; Metazoa - 299; Fungi - 217; Plants - 279; Viruses - 6; Other Eukaryotes - 282 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR