K30409

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30409

Determination of introduced cDNA(s)

J033071P08 - Rice Full-length cDNAs - Original: J033071P08

full reading [+] show sequence

GTAAAACGGA AGAAAAGAAA AGAAACAGCA ATGCCCAACT CGAGCTAGTC 
TTGTTACTAT CTTATACTAG CTACTTCAGA AGTTTTCAGG CTCATCCGAG 
TAAGAAGAGA TCGGTGATGG GTTATAAGTG TAGTAGCTGC CTGCAGGCGG 
TGGTGCTGTG GCAGTTGCTC CTGCCGTGGA CGCACATTGC GGTGGCGGCT 
GGCGCGAAGA GCTCGTCGCC GGCGGGGAAG CCGAAGGCCG CGGCGCCGCC 
GGTGGTGGCC GGGCCGGTGT CCAAGGTGGA GGACGCCACC AGGTTCCAGA 
TATACTACGG CCAGAGCTTC AAAGTCGTCA AGAACAACTG GAACGGCAAG 
AGCTACCTTC TAATGCAGAA CACATCCAAG ATGGCCACCA AGACCAAGTA 
TTGCACGGGG AGGATTAAGT CGTTCGTTAT CCCTCTTGCC AATTACTCCG 
TCGACACCAC GGCTTCTCCA GTGTCATTCT TCGAGGTGAG CAATGCGGGA 
CAAATTAAGT ACTGTTCAAT GCGGAATCTG TACAATCGTA GATAATGAAG 
CAAAAGCAAC AGCTGAAACT GAACAGGAAA AACATATCAT CTGTAGAAGC 
AAATGTTTTA TGCCTCTGAC TCTCATATTA ATTGATCCCT GCAGCACTTT 
TTGACACTCT ATGCAGCTAC TTGGAGTATT ACAAAACTTG AAGGGGATAA 
CATCTGATCA AATTGCCTCC CAGTGTGTGC TCCAATCATA TGCAAGTGGA 
AATGTCCAGC TTTTTAACAA GACCGATGCA CAGATGCTCA CACAATTTAG 
TGCACATTTC TTGAGCACTA CAGATGAAGG CTGCAATTTC GCAGCTTATG 
TACCCTCTGA AGAGGGGACA CCATTGCAAA GGGCTGAGTG GATCAAGTAC 
TTGGGAGCTT TCACAAATTC AGAAGATAGG GCTAACACAG TTTATGACGC 
AATAAAGGCA AACTACTTAT GCTTAAGCAA AGCAGCTGCG AATCTTAGCA 
CAAGATTCAA ACCTATAGTG GCATGGATTG AATTCACACA GGGTATGTGG 
ACATTTGTTA GTGATGGTTG GATTGTACAG GTAATGTCAT TTGTTTATTG 
CAGCACTTTG AACATAAAGC TGTCAACTAA ACAAATGAAA TGGAGACAAC 
TCATGCGCAT TTGGTATTTA TGCCATAAGC AGTATGTCAC AGATGCAGGA 
GCAGAGGTTG TTGATGCAAC TATTACTAAT AAGAGATTCA ACAATTCTGA 
TCCAGAGGAT ATGGATAACT TCCATGCTAT TCTTTGTGTG AGTATCGATA 
ATACATAACT GTCAGAGTAA TCATCTGTCT CACTATTTCT CATGATGCAC 
TAAAGATCCA TCGTTTCTTT TTGGAGAGCT GGAGAACTGT TACTTAGTTA 
AAATAATGTC AGAATGCTAA TACTAGACAA GGGCAAAATT GGACATTTCT 
ATGAAACACC AAAGGTTTTA GTACTTCACA AAAGTTTTAA ATGACCCTCA 
CTTGTTAAGC ATCTAACATT AAGCTTTGGT TTATGTATTT TTCAGACAGT 
TGATGTGGTC ATAGATCAGA CATATGCTTC AGATCCTGCA GAGTACAAAC 
TATCCACATT CTTGGAGAGC ATTAATGTGG ACCGTGACTC TTGTTTTAGT 
TTTGTAGCCA ACCGTAGCAT ATGGAGATTT GATAAAAGAA TAGGATATTC 
GAAGAAACTT GATTGGTTCG ATGGAGCTAT CTCCCAGCCC CAGTTGGTTC 
TTGCTGATCT AATAGAAATT TTCTTTCCAA CGGGGAATTA CACAACAATT 
TACTTCAGGA ATCTAATGAA GGATGAAGGG GTCACTGAAG TTGTCCCCGA 
AATGTGTAGT AGAAGCATAT CAACACCCAT GGAGCCAACA ATCTTGCCCT 
GCCAGTGATG ACCTTAGATG AATATGAAGA CAGAGGACCT TACAGCTACT 
GTACCCACAA AACTATGGCA ATTAACCACT GAGACCATTA CAGGTTGCCG 
ATGAAGTGAT TTGAAGTTTT AAACAAAGCA GACTAGATTG CATATTTGAG 
AAAGAATCAT GGTGACAAAG GACAATGATG TCTAAGGAAT ACTATGTATC 
TATCTCATCA TTTGACAATG AAAGAATTGT TCTCAATATA TGATATTTCA 
ATATCTTCTT GAATAATCTC CTAAATATAG TATAAGATTG AGGTACTAAC 
TGTTGTAATT TCAGTTACTG TTGGTTACAG TATTTGGGTT ATCTTTGTGT 
GATACAGACA GGAAACTGTG AAAAGAGCAC TGAAATAATG AGTACTATAG 
TTGAACTCTG GGC

Gene models with high sequence identity

AT1G65900.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 7e-43; Score: 172.00

InterPro Scan Digest

See the detailed result >

AT1G65900.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 306 Blast hits to 306 proteins in 119 species: Archae - 19; Bacteria - 238; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link: InterPro Scan - TAIR