K30504

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased length (PATO:0000574) (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30504

Determination of introduced cDNA(s)

J023110G02 - Rice Full-length cDNAs - Original: J023110G02

full reading [+] show sequence

GGCAACGAAC CTAGGAACAG GCAGGCAGGC AGCGTCGGCG AGGCCGTTGG 
GCAACGCCTC GCCACCACAT GATTTCGCCT GCCTGTTGTT CTTCGGGCCT 
CCCCTTCTCC TCCACCCTGA CTACATCAAA TTTCAACCCT GACTCCATCA 
AATTTCATGG ACAAATGAAG CTGGATTACA TGCACGCAGG AGGCGCGCGC 
ATCGGCGTAA CGTCTCCTTG GCGTTGAGGG CTTGAGCTCG TGGCAAGCGA 
TGACATCGTC GACGCTGTCT TCAGCGCTGA GCTCCATGGA GGTGATGCTG 
GATGCGCTCA TGCAGAGAGG AGTAGGAAAG CCGGAGGAAA AGCCCAAGGA 
GGAGGCGCCT CCAGCGCTGC CCACACGCCC CACGGTGAGG GGCAGGCCGC 
CATCTCTGCA GAGGCCTGGT TCCCCTCCCC CTTGGGTTCA CCGGTCACCA 
TCGTTACCGC CTATGCTGGA AGTGGACGAG AAACTTGCGG TCAATTCGGT 
GCTGGAAAGA AGGGCCACGG TGGCGGAAGA GGCGGTAAAG CAGAAGGACG 
ACGTGGTGAG GCAGAAAGAT GAGGAGATAG CCGCGCTGAG GCAACAGGTT 
GAGCACTACG AATCCCGGCT CTCGGAATGC GAGGCGAGGA TGAAATCCGT 
GGAGGAGGAG CTGCGGAAAC AGATCACCAC GATGCAGATC GCTCAGAACA 
ACGCTGGAAG AACCGGTGAA TCGACGACAA GGACGCACCA CAGGCAGGAA 
CTATCAGGCA CTAGTGGTGC TCCTGCTCAG TCGTCAGGGT GGCGAGAGGA 
GGAAGCATCG GTGACGCGGC AACAGGCTCG TGGCCGCGAA TCGAACGTTG 
CTGCAGTCGT CGACGAAAGG AAAACCGATG CCGTGAGCCG CTTGGCCACG 
GAGCTCCGGC AGGAGAGCGA GGCGTTCGAG CACCGCGCGC GTGCGGTGAC 
CGAAGCGGGA CCGCCGACTG CCAAGTCGGT CGACGAGCTC AAGAAGCTGA 
AGCGGCAGTT CGGGACGTGG AAGAAGGAAT ACGGGGCCCG TCTGCGTAAG 
ACCAAGGCCG AGCTGAAGAA GCTCGTCCGC TCGGAGAGGG GTGGCCACGG 
GAACCGCCGC AGGTGCTGCT CGTGGAAGAT CAAGCTGCCG AAGTGCAGGT 
TTCCCAAGTG CTGCGCGTTC AAGCTTCCAA GCCCTTCCTC TTGCTGTTCC 
TGCAGTTGCT TCCGCCGCTG CTGCTAGCCA CGCAAGATTG CAGACGCTTG 
GTTTGCTTCT TCTACTTGTA CATCGTTGTA AAATTGTTGG GGGTGATCGA 
ATTGACAAAA GGAACAAAAC GAAATATGAC CATAGCTAGA T

Gene models with high sequence identity

AT1G50360.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 1e-18; Score: 91.30

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT1G50360.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator Summary: member of Myosin-like proteins
Computational Description: VIIIA; FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: plasma membrane, myosin complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 1 (TAIR:AT3G19960.1); Has 6923 Blast hits to 6476 proteins in 764 species: Archae - 0; Bacteria - 9; Metazoa - 4624; Fungi - 710; Plants - 496; Viruses - 0; Other Eukaryotes - 1084 (source: NCBI BLink).
Link: InterPro Scan - TAIR