K30648

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30648

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30648

Determination of introduced cDNA(s)

  • J023031G02 - Rice Full-length cDNAs - Original: J023031G02

    full reading [+] show sequence

    Nucleotide sequence: J023031G02 - full reading 
    GATCCATCAC CCCCACCACT ACATCACCCA TCCCCATCCA TCTCTCCCCC 
    CTCCCTTTCC TCCTAAACTT CAGCGGCGAC ACCCCTCGCG AGCCGCTCCT 
    CCTCATCCTC CTCCGCCGCC GCCGCCGCGT CCCCTCGGTG CCCCCCTCTC 
    CGCCGGCCGC CGATCCGGCC CCGCGAGTTG TAGGAATCCT TGATAAGGCT 
    GATGGCTTCG ATGGATGAGC CTCTTTATCC CATCGCTATA CTGATAGATG 
    AGCTCAAAAA CGAAGATATT CAATTGCGTC TGAACTCCAT TAGGAGGCTC 
    TCCACAATTG CACGAGCACT TGGAGAAGAA AGAACCCGGA AGGAGTTAAT 
    TCCTTTTCTC AGTGAAAATA ATGACGATGA AGATGAGGTG CTTCTTGCTA 
    TGGCTGAAGA ATTGGGCGTG TTCATTCCTT ACGTTGGGGG TGTAGAACAT 
    GCTCATGTTT TGCTACCACC ATTGGAGACA TTGTGTACAG TGGAGGAAAC 
    CTGTGTCCGA GACAAGGCAG TTGAATCTCT GTGCCGTATT GGAGCACAGA 
    TGAAGGAAAG TGACATTGTA GACTGGTTCG TTCCAGTAGT AAAGAGGCTA 
    GCAGCTGGTG AGTGGTTTAC AGCTCGAGTA TCGTCTTGTG GACTTTTCCA 
    TATAGCATAT CCAAGTGCTC CTGATCAATT GAAGGCAGAA TTGAGGACCA 
    TTTATGGTCA GCTATGCCAA GATGACATGC CTATGGTCCG AAGGGCAGCT 
    GCATCAAATC TTGGAAAGTT TGCAGCCACA GTTGAACAGA ACTATCTAAA 
    GACAGAAGTC ATGTCGATAT TTGATGATCT AACCCAAGAT GATCAAGATT 
    CCGTACGCTT GTTGGCAGTT GAAGGCTGTG CTGCTCTTGG GAAATTGTTG 
    GAACCACAAG ATTGTGTAGC ACATATCCTT CCAGTTATTG TCAATTTCTC 
    CCAGGACAAA TCATGGCGAG TTCGTTATAT GGTTGCCAAT CAATTGTATG 
    AGCTCTGCGA GGCAGTTGGT CCTGAACATT CTAGGGAGCA GTTGGTGCCG 
    GCATATGTTC GTCTCCTTCG TGACAATGAG GCGGAAGTGC GGATAGCGGC 
    TGCAGGGAAA GTTACTAAGT TCTGTAGGAT TTTAAGTCCT CAGCTTGCAA 
    TTCAGCATAT TCTTCCTTGT GTCAAGGAAT TGTCATCAGA TTCATCTCAG 
    CATGTTCGTT CAGCTTTGGC TTCAGTTATT ATGGGAATGG CCCCGGTCTT 
    GGGAAAGGAG GCTACAATCG AACAACTTCT TCCTATTTTC CTTTCTTTGC 
    TCAAGGATGA ATTTCCTGAT GTTCGGCTCA ATATAATCAG CAAGCTCGAT 
    CAAGTTAATC AGGTTATTGG AATTGATTTG CTGTCACAAT CACTGTTACC 
    GGCGATCGTA GAACTTGCAG AGGATAGGCA CTGGAGGGTT CGGCTTGCAA 
    TAATTGAGTA CATTCCTTTA TTGGCTAGTC AATTAGGCGT TGGATTTTTC 
    GATGACAAGC TGGGGGCACT TTGCATGCAA TGGTTGGAAG ATAAGGTCTT 
    CTCAATCAGA GATGCTGCTG CAAACAACTT GAAGCGCCTA GCTGAGGAGT 
    TTGGTCCAGA ATGGGCGATG CAGCATATAA TCCCTCAGGT GCTGGAGAAG 
    ATAAACAACC CGCATTATCT CTACCGCATG ACCATCCTGC AAGCTATTTC 
    ATTGCTGGCC CCTGTCATGG GTGCCGAAAT CACTTGTCAA CAGCTGCTCC 
    CTGTTGTGAT TAATTCCTCA AAGGACAGAG TGCCAAACAT CAAATTCAAT 
    GTTGCGAAGG TTCTGCAGGC ACTTATACCG ATCCTTGATC AATCTGTTGT 
    GGAGAAGAAC GTGAAACCAT GCCTCGTTGA ACTCAGTGAG GACCCTGATG 
    TGGATGTAAG ATACTATGCA AACCAGGCCC TTCAGGCATG CGATCAAATC 
    ATGATGTCAA GCTAACTGTC TTCCTGTCCA GTATTTAGAA CTTGATTCTC 
    TTAGTCCAAA TTTTGGAATA TTTGTAATTT GCACTTTAGT TTGAAGAGTT 
    CCTTTCTAGC CCCAGTAACA GACCAAACAC TTCCCAAGAT GATAATGTAT 
    GGCTCCGACC CCTCGTTCTC TGTGTTTGAT GTTGATGATG TTGTAATTGA 
    GCAAGATCGG ACACATTATT ATGTTTGTTT ACATGGTAGT TTTGGGCCTT 
    GGTTTCTGTG

    Gene models with high sequence identity

    1. AT3G25800.1 [+] show detail - protein phosphatase 2A subunit A2
      E-value: 0; Score: 999.99

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Armadillo-type fold 1.2e-113
    ProfileScan HEAT, type 2 9.843
    ProfileScan HEAT, type 2 9.899
    ProfileScan HEAT, type 2 9.197
    ProfileScan HEAT, type 2 13.524
    ProfileScan HEAT, type 2 12.625
    ProfileScan HEAT, type 2 12.288
    ProfileScan HEAT, type 2 12.765
    ProfileScan HEAT, type 2 11.669
    ProfileScan HEAT, type 2 8.522
    ProfileScan HEAT, type 2 9.506
    ProfileScan HEAT, type 2 11.388
    ProfileScan HEAT, type 2 9.59
    Gene3D Armadillo-like helical 2.9e-185
    HMMPfam HEAT 0.0017
    HMMPfam HEAT 3e-05
    HMMPfam HEAT 0.0099
    HMMPfam HEAT 0.0053
    HMMPfam HEAT 0.0058
    HMMPfam HEAT 0.0051
    HMMPanther SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGUL 1.5e-298

    See the detailed result >

    AT3G25800.1

    Model type
    Protein coding
    Short Description
    protein phosphatase 2A subunit A2
    Curator Summary
    one of three genes encoding the protein phosphatase 2A regulatory subunit
    Computational Description
    protein phosphatase 2A subunit A2 (PP2AA2); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: response to cadmium ion, regulation of phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: protein phosphatase 2A subunit A3 (TAIR:AT1G13320.3); Has 2834 Blast hits to 1736 proteins in 250 species: Archae - 15; Bacteria - 74; Metazoa - 1458; Fungi - 417; Plants - 306; Viruses - 0; Other Eukaryotes - 564 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR