K30746

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30746

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30746

Determination of introduced cDNA(s)

J023112L03 - Rice Full-length cDNAs - Original: J023112L03

full reading [+] show sequence

GGCTCCTCCG CCTCCGCCTC TCATATTTTT CCCATTTTTC ACCTGCCTTA 
ATTCGCCCTC CTCCCATAAC CGTAGTAGTA ATCGTACTCC TCCATTCTCG 
CCGGAATCCA GAGCGAAGCT GTAGGAAATT GTTGGGAGGA GGAGCAATGC 
CTTACTGCGA GGTGGACAGG TACCAGAACG GCGACGAGTG GGACGGCGTC 
CGCCTCTTCT ACCGCCGCTT CGGCCGCGGC GCCACCAAGG TGCTCCTCGT 
CATCGGATTG GCGGGGACGC ACGACTCGTG GGGCCCGCAG ATCAAGGGGC 
TGACCGGGTC GCTGGAGCCG GCCGCCGACG ACGAGGAGTC CGGCGACGCC 
GCGGCGGCGG AGGGGGACGA CGGCGATGGC ATCGAGGTCT GCTGCTTCGA 
CAACCGCGGC GTCGGCCGGA GCTCCGTGCT CCCGCACAAA TCCTACTACT 
CGACGGTGAT CATGGCGAGG GACGCTCTGG CCTTGATGGA CCATCTGGGG 
TGGAAGAAAG CTCATGTATT CGGCCATTCC ATGGGCGCGA TGATATCCTG 
CAAGCTGGCA GCCATGGCGC CGCACAGGAT TTGCTCGTTG GCGTTGCTTA 
ATGTTACTGG AGGTGGCTTC CAGTGCTTCC CGAAGTTAGA TGGGCAGATG 
CTCTCGCTTG CATTCCGTTT CTTAAGGGCA AGAACTCCAG AAGAAAGAGC 
TCTGGTAGAT TTGGAAACCC ATTATACAAA GGAATATCTT GATGAGAAAG 
TTGGATCATG CACGAGGAGA ACAATCCTCT ATCAAGAATA TGTGAAGGGC 
ATATCATCGA CAGGGATGCA GTCTAACTGT GGGTTTGAAG GTCAAGTTAA 
TGCATGCTGG ACTCACAATA TGACAACTAA AGAACTAGAT ACAATTCGGT 
CTGCCGGTTT TCTAGTTTCA GTTATTCATG GGAGGTCTGA CATTATTGCG 
CAATTATGTC ATGCGAGACG ACTTGCAGAA AGGCTTATTC CTGTTGCTAG 
AATGGTCGAA CTTCATGGTG CGCATCTAGT AAGCCATGAA AGACCAGAGG 
AGGTCAACAA TGCACTAATG GAATTAATAA AAGCCACAAA ATCTATGATG 
AAACCTGAGG AATGGTCATC CCAGCCAGAG AATTCATCAG GAGTGATACT 
GATGGGGTTT GAGCATATGA GGAACATTGT AAAAGTAATG AAGCCAGTAA 
GGGTCGCAGC AATCGAATCA TAAGAAACAA AACTCATGTA AATTACTCTC 
AGAGCCGTCG AGGAGACCTG GTATTTTCAT GTCTCCTCAG TACTGTGGAG 
ATGATGGTTT TAGAATAGCA TCTCCGAAGA CTTCCTGAGA AAACTTCTGC 
TCTAAGCAGA ATAAGTGAAC AATACGGAAG AAAATTGATG AGGTATTTGG 
TGCGCGCCTT GGACAGAAGC GTCCCAGGGC AGAAATGCAC AAACTGATGT 
ACCCGTATGA GTGTAAATGT TGTTACCGTA TCACGGCCTT ATGCTGTCGC 
CATTCTTTTG TATCAGCATG AAATGTGATT ATTCCCATCA ATAATAAACC 
TGGTTCCCTG C

Gene models with high sequence identity

AT5G53050.3 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 6e-120; Score: 428.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	1.4e-47
superfamily	alpha/beta-Hydrolases	7.7e-46
HMMPanther	CARBOXYLESTERASE NP	1.4e-60
HMMPanther	ALPHA/BETA HYDROLASE RELATED	1.4e-60
HMMPfam	Alpha/beta hydrolase fold-1	8.5e-20

See the detailed result >

AT5G53050.3

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G02340.1); Has 11083 Blast hits to 11081 proteins in 1482 species: Archae - 92; Bacteria - 8297; Metazoa - 245; Fungi - 229; Plants - 334; Viruses - 5; Other Eukaryotes - 1881 (source: NCBI BLink).
Link: InterPro Scan - TAIR