K31009

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31009

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31009

Determination of introduced cDNA(s)

  • J033095O09 - Rice Full-length cDNAs - Original: J033095O09

    full reading [+] show sequence

    Nucleotide sequence: J033095O09 - full reading
    GGGCCCATCA AACACAGAGT GCCATCGCTC ACACGGCCGG CGGCGGCGGC 
    GATGGCGAGG GGCGTCTCCT ACGTTTCCGC GGCGCAGCTC GTCCCCATGC
    TCCGGGACCC CCGGATCGCC GTCGTCGATG TCAGGGACGA AGAGAGGATC
    TACGACGCGC ACATCGCCGG CTCGCATCAT TACGCCAGCG ACAGCTTCGG
    GGAGCGGCTG CCGGAGCTGG CCCAGGCCAC CAAGGGCAAG GAAACCCTCG
    TCTTCCACTG TGCCCTCAGC AAGGTGCGTG GCCCATCTTG TGCGCAAATG
    TATCTGGACT ATTTGTCAGA GGCTGATGAA GATTCAGATG TAAAGAACAT
    CATGGTCCTT GAACGTGGAT TTAATGGATG GGAACTTTCA GGGAGGCCTG
    TTTGCCGCTG CAAGGACGCT CCTTGCAAGG GTGTGTGCTC TTGAGTATCC
    ATATGAAACT ATGCATTTAC CTGTGCATTT CAAATTTGGT TGCTACCTGC
    AGACTTCAGG GTAGCCATTT ATGCTTTATG GTCACTACAG CACATTAAAA
    ACCGTGTATC TCACTTTGGT GGATCCGCAA TTGTGCTATT ATGTGGCTCT
    ATCAATTCAG TGGCCGTTAA TGTCACTTCA CGACATGTAA ACTGAAAACC
    ACATTGGTAA TTATTGAAAA TCTTCTGCTT CCGTTCC

    Gene models with high sequence identity

    1. AT5G03455.1 [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
      E-value: 7e-48; Score: 187.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Rhodanese-like 8.9e-28
    Gene3D Rhodanese-like 2.6e-47
    HMMPfam Rhodanese-like 1.5e-10
    ProfileScan Rhodanese-like 13.405

    See the detailed result >

    AT5G03455.1

    Model type
    Protein coding
    Short Description
    Rhodanese/Cell cycle control phosphatase superfamily protein
    Curator Summary
    Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.
    Computational Description
    CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR