K31009

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31009

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31009

Determination of introduced cDNA(s)

  • J033095O09 - Rice Full-length cDNAs - Original: J033095O09

    full reading [+] show sequence

    Nucleotide sequence: J033095O09 - full reading 
    GGGCCCATCA AACACAGAGT GCCATCGCTC ACACGGCCGG CGGCGGCGGC 
    GATGGCGAGG GGCGTCTCCT ACGTTTCCGC GGCGCAGCTC GTCCCCATGC 
    TCCGGGACCC CCGGATCGCC GTCGTCGATG TCAGGGACGA AGAGAGGATC 
    TACGACGCGC ACATCGCCGG CTCGCATCAT TACGCCAGCG ACAGCTTCGG 
    GGAGCGGCTG CCGGAGCTGG CCCAGGCCAC CAAGGGCAAG GAAACCCTCG 
    TCTTCCACTG TGCCCTCAGC AAGGTGCGTG GCCCATCTTG TGCGCAAATG 
    TATCTGGACT ATTTGTCAGA GGCTGATGAA GATTCAGATG TAAAGAACAT 
    CATGGTCCTT GAACGTGGAT TTAATGGATG GGAACTTTCA GGGAGGCCTG 
    TTTGCCGCTG CAAGGACGCT CCTTGCAAGG GTGTGTGCTC TTGAGTATCC 
    ATATGAAACT ATGCATTTAC CTGTGCATTT CAAATTTGGT TGCTACCTGC 
    AGACTTCAGG GTAGCCATTT ATGCTTTATG GTCACTACAG CACATTAAAA 
    ACCGTGTATC TCACTTTGGT GGATCCGCAA TTGTGCTATT ATGTGGCTCT 
    ATCAATTCAG TGGCCGTTAA TGTCACTTCA CGACATGTAA ACTGAAAACC 
    ACATTGGTAA TTATTGAAAA TCTTCTGCTT CCGTTCC

    Gene models with high sequence identity

    1. AT5G03455.1 [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
      E-value: 7e-48; Score: 187.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Rhodanese-like 8.9e-28
    Gene3D Rhodanese-like 2.6e-47
    HMMPfam Rhodanese-like 1.5e-10
    ProfileScan Rhodanese-like 13.405

    See the detailed result >

    AT5G03455.1

    Model type
    Protein coding
    Short Description
    Rhodanese/Cell cycle control phosphatase superfamily protein
    Curator Summary
    Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.
    Computational Description
    CDC25; FUNCTIONS IN: protein tyrosine phosphatase activity, arsenate reductase activity; INVOLVED IN: protein amino acid phosphorylation, response to arsenic; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR