K31104

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31104

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31104

Determination of introduced cDNA(s)

J033105O21 - Rice Full-length cDNAs - Original: J033105O21

full reading [+] show sequence

GACCACACAC ACCCACACTG GCAGCAGCTC ATACACATAG CTAGCTCAGC 
TGAGACACAC ACACACACAG TGAGTAGTTC AGCTCAAAGC TAGCATCAGC 
AGCAGAGCTA ATTAACAAAC ATGGCGTCCG GGAGCAGCGG CGGCGGCTAC 
GCGGACGAGA AGGGGCCGGG GGCGGCGACG ATGCAGGCGC TGGGGCTGCA 
GCAGCAGCAC GGCGGCGGCG GAGAGGTGGA AGAGGAGTCG TCGGAGATGG 
GGGAGAAGAC GGCGGCGAGG ACGCGGCTGT CGGGGCTGCT GTGGCACGGG 
GGGTCGGCGT ACGACGCGTG GTTCAGCTGC GCGTCGAACC AGGTGGCGCA 
GGTGCTGCTG ACGCTGCCCT ACTCGTTCGC GCAGCTGGGC ATGGCCAGCG 
GCCTCCTCTT CCAGCTCTTC TACGGCCTCC TCGGCAGCTG GACCGCCTAC 
CTCATCAGCA TCCTCTACCT CGAGTACCGC ACCCGCAAGG AGCGCGACAA 
GGTCGACTTC CGCAACCACG TCATCCAGTG GTTTGAGGTG CTGGATGGGC 
TACTGGGGAG GCACTGGAGG AATGTGGGAC TGGCCTTCAA CTGCACGTTT 
TTGCTGTTCG GGTCGGTGAT CCAACTGATC GGGTGTGCCA GCAACATCTA 
CTACATCAAC GACCATCTGG ACAAGCGGAC ATGGACGTAC ATCTTCGGCG 
CCTGCTGCGC CACCACCGTC TTCATCCCGT CATTCCACAA CTACCGCATT 
TGGTCCTTCC TCGGCCTCCT CATGACCACC TACACCGCCT GGTACATCGC 
CGTCGCCTCC CTCATCCACG GACAGGTGGA GGGTGTGGCG CACTCTGGGC 
CCACAAGCAT CGTGCTCTAC TTCACGGGGG CCACCAACAT CCTCTACACC 
TTCGGGGGCC ACGCTGTCAC CGTGGAGATA ATGCACGCGA TGTGGCGGCC 
GCAGAAGTTC AAGGCGATCT ACCTGCTGGC GACGGTGTAC GTGCTGACGC 
TGACGCTGCC GTCGGCGTCG GCGGCGTACT GGGCGTTCGG GGACGCGCTG 
CTGACGCACT CGAACGCGCT GGCGCTGCTG CCGCGGACGC CGTGGCGCGA 
CGCCGCGGTG GTGCTCATGC TCATCCACCA GTTCATCACC TTCGGCTTCG 
CCTGCACCCC GCTCTACTTC GTCTGGGAGA AGCTCGTCGG CCTCCACGGC 
TGCCCCTCCC TCTGCAAGCG CGCCGCCGCC CGCCTCCCCG TCGTCCTCCC 
CATCTGGTTC CTCGCCATCA TCTTCCCCTT CTTCGGCCCC ATCAACTCCG 
CCGTCGGCTC CCTCCTCGTC AGCTTCACCG TCTACATCAT CCCCTCCCTC 
GCCTACATGG TCACCTTCCG CTCCCCGCAA TCCCGCCAGA ACGCGGTGGA 
GCGGCCGCCG AGGTTCGCCG GAGGATGGAC GGGGGCGTAC GTGATAAACT 
CGTTCGTGGT GGCGTGGGTG CTGGTGGTCG GCTTCGGCTT CGGCGGGTGG 
GCGAGCATCA CCAACTTCGT CCACCAGGTC GACACCTTCG GCCTCTTCGC 
CAAGTGCTAC CAGTGCCCGC CTCACCCCGC CGCCGCCGCC CTCTCGCCGC 
CGGGTGCCAT CGCTCCGGCG CCGGCCTCGA TGCTGCCGCC GTTCAACTCC 
ACCGCCGCCG GCATCTTTGC CGCTCCGGTG CCGTCTCCTG CTCCGGCTCC 
GGCACCGATG CATTTCGTCC TTGGTCACCA CCACCATCAC CGGCACCACC 
GCCACGGCCT CTAGCTAATT AATCGAGATC AATCAAGATC ATGATTATCA 
GAGGTTGGGT TTGCATTATT GCACTAGTTT TTAGCGAGCT ACTAGCTAGT 
TGATCATCAC TGCAAGATTG TTAATTAGCG CTAGTAATTA GTAAAAGTAA 
GCCTCTTTTC CTAATCCTAT TGTATGCTTT GCTTCTTTCT TCTTCTTCTG 
GTTACTGAGA GAGAGTGAGA GTGAGAATGT TTGGTGGTGG GGTATGCATG 
TCAGAGACAC GTTTC

Gene models with high sequence identity

AT2G21050.1 [+] show detail - like AUXIN RESISTANT 2
E-value: 0; Score: 703.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	AUX1-LIKE AMINO ACID PERMEASE	0
HMMPanther	AMINO ACID TRANSPORTER	0
Coil	coiled-coil	0
HMMPfam	Amino acid transporter, transmembrane	2.7e-71

See the detailed result >

AT2G21050.1

Model type: Protein coding
Short Description: like AUXIN RESISTANT 2
Curator Summary: Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.
Computational Description: like AUXIN RESISTANT 2 (LAX2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUX1 3 (TAIR:AT1G77690.1); Has 1017 Blast hits to 1012 proteins in 134 species: Archae - 0; Bacteria - 2; Metazoa - 94; Fungi - 224; Plants - 668; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR