K31204

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31204

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31204

Determination of introduced cDNA(s)

  • J033125A17 - Rice Full-length cDNAs - Original: J033125A17

    full reading [+] show sequence

    Nucleotide sequence: J033125A17 - full reading 
    GGGCCATGAA CAAAGTTTTC GCTTTTTTTT TATGCGGGAG AGATGGGGAT 
    GATTATGCTT GAGGGGGGAT CTTGAGCGTG TGTATAGGAT CGAGGGTTTT 
    GAACCTGATT TCTGAAAGCG CCTGGTTTGT GAGGCTCAAG AGTCTCTGCT 
    TTTTGCCGGT TTGAGCTTTT AACGAAAGAG GCGATGGGCT CTGTTCTGCT 
    GAATTAGCCA CCTCGAGGAT GGGGAGGTTG AAGGATTGAA GCTCTCTTTT 
    CCTTTCGCAG AAGGTGTAGG ATCCTGATTT TGTTCTTGAG GTATGTCCTC 
    AACCAGTTCT TCACAGCCAC CAGCATCGTC AGATAGAGAA TCTACACCAG 
    CCAGTGATAA TGCAACATCT CCTGATTCAG ATGGCACGAA TTCTGCTGGA 
    CCCGCAAGAA GCAGAATTGC ACTGCAGTTG GATCAGCGGT CATTGCATTT 
    TTCTGTTACT GCTTGGGTTC TTATTGTTGC ATTGATTGGA ATCCTTCCAC 
    TGACACCACG ACAACTGCAA TATAAGGGAT ATCGTTTGTC ACTTCTCGGC 
    ACAACCTGCA CCACAGGCTA TGCTTTGTTT GCTTTTTATC GGCTACCAAG 
    AGCAGGAAAC ATGCATGCTG CTCAGATCTT TCACCATGTA GCTTCGTCAA 
    AGGATTTTAT ACCATTCATG TACTGTCTTA TGTTTGTCAT GTCTAAACTG 
    CACTTGAAGC TTGTTTTGGT ACCAGTGATT TGCTGGGCAC TTGAACATGT 
    GGCCAGATTT CTACGGCGCC ATTTTACTAA TTCCTCTCTA TACAGGACAT 
    ATCTGGAGAA ACCTTGCACA TGGGTTGAGA CAAACACAAC TGCAGTCAAA 
    TTCCTGAGTT CAAATGCGGA GATTTTGTTG GGATTTCTTT TGATTTTGTC 
    TCTGTTCTCG CGACAACGCA ATCCTATGCA AACGTTCATG TACTGGCAGT 
    TACTGAAGCT CATGTATCAC TCTCCTTTCA CTGCCGGTTA TCACAGAGCT 
    ATCTGGCTTA AAATTGGCCG TACAGTTAAT CCCTATATCC ATCGCTACAC 
    TCCTTTTCTT CATGACCCGA TAAATGCTGG CATGAGATGG TGGTTCAGGT 
    AGCATGGATA TGGCTCAATT AATCATGTAA AGGTGTTTTT GGTTACAGTT 
    CACAGTTAAC ACATGGAGGA TCTTTTCAGT AAGTTGTAGT TTGCGAGCGA 
    CATGTTTAGT ACCTTTTCTT TTTTGCGATG TTGCGCTGAT ATTACTTTTA 
    GTTACTGACA AGTAATTCTT GTAACTTTAC CTTGACTGTA GAACTAGTGT 
    AGACCTTAGT AATATGGCCA ATACCATGAA GTGAAAAATG GAAAAGCAAT 
    TTATTACTAT G

    Gene models with high sequence identity

    1. AT3G02420.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 3e-69; Score: 259.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G02420.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0121 (InterPro:IPR005344); Has 72 Blast hits to 71 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 60; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR