K31219

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31219

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31219

Determination of introduced cDNA(s)

  • J013149L15 - Rice Full-length cDNAs - Original: J013149L15

    full reading [+] show sequence

    Nucleotide sequence: J013149L15 - full reading
    GTGCTGATCC CCAGACGCCG GCGGCTACTG CGTTTGCGAT GCCCGCCGCC 
    GCCGCCGCCG CCGCGCCGCC CAATCCCAAC GTTCTGCAGC TAGCCCCACG
    CCTCCGAGGC CTCGTCTCCT TCCCCTCCTC ATACTCCTCC TCATCGCCGT
    TCTCCAACCG CCTCCGCCTC CGCCTCCCCC GCGCCGCCTC CATGTCCGCC
    GAGGCGCGGG TGCCCGTGGC GCCGCCGGCC CACCCCACCT ACGACCTCAA
    GGCCGTCATC AACCTCGCCC TATCCGAGGA CGCCGGCGAC CGAGGGGATG
    TATCTTGCTT GGCAACCATA CCTTCTGACG TGAAAGCTGA AGCCACCTTT
    ATTGCAAAGG AGGATGGTGT TGTCGCTGGA ATAAGCCTAG CAGATATGAT
    ATTTAAGCAA GTTGATCCAT CATTGAAGGT TGAATGGTTT GAAAGTGATG
    GAAATTATGT CCATAAGGGA TTGCAATTTG GGAGAGTATA TGGTTGTGCT
    CGCAACATTA TTGTTGCTGA AAGAGTTGTG CTCAATTTCA TGCAAAGAAT
    GAGTGGAATT GCTACAATGA CAAAGGCCAT GGCCGACGCT GCTCATCCAG
    CATGCATACT GGAAACAAGG AAAACAGCTC CAGGTTTACG CCTCGTTGAC
    AAGTGGGCAG TACTAATTGG TGGTGGAAAG AATCACAGAA TTGGCTTATT
    TGATATGGTT ATGATAAAGG ATAATCATAT TTCTGTTGCT GGGGGCATAA
    CAAATGCAAT GAAATTTGTT GATCGATTCT TGGCGAAGGA AAAGCTTGCA
    CTTCCTGTTG AGGTTGAGAC AAGAACACTT CAGGAAGTAA AAGATTTATT
    GGAGTATGCT GCTGAGAACA ATACCTCTTT AACTCGTATA ATGTTGGATA
    ATATGGTTGT CCCTCTTGGT AACGGTGATA TTGATGTATC AATGCTCAAG
    GATGCCGTGG AGTTGATAAA TGGTAGATTT GAGACTGAGG CATCTGGAAA
    TGTGACTATT GACACAGTGA AGAAAATTGG AGAAACGGGG GTTACCTATA
    TTTCAAGTGG AGCATTAACA CATTCTGTAA AGGCACTTGA TATATCTCTT
    AAGATAGACA CTGAACTCGC TCTCCAAGTT GGAAGGCGCA CAAATCGCGC
    CTGACTCTAC AGAACTAATG TAACCTTGCA AGATCTGCAG GGTGTTTCTG
    TGGCGTGGCT TGCCAGTCTA TCAATCCATG CCCTTCTCAT CAACTTGTAA
    GCGTTGAGTG TACAACAAAG AATGTGTTTT CCCATATTTA TGGGATATAA
    ACCAACACCA CATAATACAG CAAAATAATA ACATTACCTT GTAGGCTTGC
    CTACCGTCCT AGCATTTGTA TTTGGTAGAA AAAAAACTGC AGATTGCGGC
    AAGTTATCGA ATTTTACTCA GGTATTAATA AGACTTTTTG CACCATGAAA
    AATTAGCAAG CTGGACACTG TAAATGGGAT GTGCGCGGCA TTGAACTTGC
    AGTTCTGCAC TTGTGTTTGA CCAAACAAAC ACTATAAAAT GGTGATGTTT
    GTGATCTACA AAAGAAAAGG AAGTCTAACA CAGCAGTGCA TTCTTTTTCA
    GATTCC

    Gene models with high sequence identity

    1. AT2G01350.4 [+] show detail - quinolinate phoshoribosyltransferase
      E-value: 5e-140; Score: 494.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 3.2e-25
    Gene3D Aldolase-type TIM barrel 3.5e-42
    HMMTigr Nicotinate-nucleotide pyrophosphorylase 1.5e-97
    HMMPfam Quinolinate phosphoribosyl transferase, C-terminal domain 7.7e-58
    HMMPfam Quinolinate phosphoribosyl transferase, N-terminal 6.3e-25
    superfamily Quinolinate phosphoribosyl transferase, C-terminal domain 8.7e-42
    superfamily Nicotinate/Quinolinate PRTase C-terminal doma 3.6e-34

    See the detailed result >

    AT2G01350.4

    Model type
    Protein coding
    Short Description
    quinolinate phoshoribosyltransferase
    Curator Summary
    At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
    Computational Description
    quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR