K31510

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31510

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31510

Determination of introduced cDNA(s)

  • J033037J10 - Rice Full-length cDNAs - Original: J033037J10

    full reading [+] show sequence

    Nucleotide sequence: J033037J10 - full reading 
    GTGCCGCCAA AACCCTCGCC TCCTTCCCCC CACGCCGCGC TCCGACCTCT 
    CGCCGCCGGC GAGCCCCCGC GTGATCTCCA TCCTCCAACG CAGCGCCGCC 
    GCCCGCCCGC GCTCCCGACC ACCGCGGCCC TAACGCGCTG CGCCGGGGGA 
    GCTTCCCGTC TCCGCGGCGC TGCTTCGCGT ACGCCTCCTC CTCCTCCTCC 
    CGCCGCCGCA ATTCCGACCT CCTGATGTGC TCCGAGAAAG GCATCGGGGA 
    GGAGCCGGCT GTTGCCCTCG CCGTCAATCT CTGATTTCCA CCCAAGGAGG 
    AGGGATCGAA GCAGGAGGCC TGAGCCCAAG AATCCAGCTG GATTAGGTTA 
    CCATTTTCAT CAATCTGAGT GAGTGTTACA CCGGCTTTGA CACAATTAAT 
    TGCAATACTA CTGTTTCTGC TGACCTGCTT TGGTCTAGTG GGAGATCAAG 
    TGTTAATGTT TCCGATTTGT GGTATCTCCA GGACAGTGAC TGAAGGTACA 
    CAAAGAGCTG AACAAAAGAG CTATTGGGTT TATTTCCCTT AACAGTTTGT 
    TGGGAACATT TGCCAAATAG GTGGTTCAGA ATTGCCTCCA AACCCATGTG 
    TTTCACACAC ATCTGATCAC ACCCAATATA CACATTCCGT ACAATCTTCT 
    CTCGTTTGCA ATGGGTCCTC GCCCACCTGG TGGTTCTTCA GATAAAAAAA 
    GTTGTCAAAA TGTCACACCA GATAAAGACA GCTCTATGAA TTTCTGCCAC 
    CAACAATATC CGCAGCACCT ATTTTCACAA CCACCATATG CAATGAATTT 
    CCCATTCCCA CCATTTCCTC ACTACCCTCC ATACACACAA AATTTGCAAT 
    ATGCTGTTCC ACCACAATAT GCTCCATACA CATTACCACC TCCTGCTGGA 
    GCTATGCCAT CAACATTTTT ACCTGCTCCA GTTATTCCAT CCAAGGCACC 
    GTCTGACCAA GGCACCCCGC GTTCAATAAC TGGTCCAGGA GAACAAGGCA 
    CTGACAATGC TGAACCTGAG AAGGCTACTA AGCGACTATA TTGGACAGAA 
    AAGGAGGACA TAAGATTGAT AAGCGCCTGG TTGATTTATT ACAAGACTGA 
    CAGGTACTGG GAAAAGGTTG TAGCAGAATA CAACAGTACA ATCCCTGCAA 
    CTCGAAGAAG GGAACTTCAA CATGTGAAGG GCCACTGGCA CAAGATATTC 
    AGAAAGGTGG CACACTTCCA TGATTGTTGG TGCCGGGTTA AGGCAAAATA 
    TCCTAGTGGC CACTCTGAGG GCATGCAACT GATGGACAAA ACTTGGCTGA 
    TGTATAATGA GGAAGCACGT GTGATGTATC TTGAAGAAGC AGAGCATAAT 
    TTCGCCTTCG ACCATTGCTG GAAAGCAGTT TGGAACCAAC CCAAGTGGAA 
    AGCATACATG TCTTGTTTAT TTACGAAAAG AACAATGCAG TCTGATTCTT 
    GGGAGTACAT GTCGTCTTCT GAGGACTCTG AAGAAATGCC TGGAAAAGAA 
    ATAGGTGAAG AAGTTTGCAT GACATCTAAG GAAGCTAAAG TTAAGAGGTC 
    AACTTCGTCT TCAGAGATGC AAGAAGACAT GCTTATCAAG AACCCTGAGG 
    AGCTGACAGA AGTAGAGCCT TCTATCTCCA ATGAAAAGCA TCTGTTGGCC 
    AGTTTGAAAC AACAAGATGC TTGCACCAAG GACACAGGAA TTTCCAAGAA 
    GCAATCAGAA TTATTGACAG CTGATACTTC CTGGCCCACT GGATTTCGTC 
    TTGTTGACAC TTCAGAATTG AATGAACATC AACAGGGGTT GGCAGTAAGG 
    GATGATATGC TTGAAAAAGA ATCACGTCCA CAAGGTTTCG ATGCACAAGA 
    CAACGAGAGG GCGACAAGGG AAAACATTCC TAGAAAAGAA ACACAGCCAC 
    GAATTTGCAA GGCACCAAAG TTCAGTCGGA AACGTAAAGG CAAGGCATCG 
    TCTTCCTCAT GCGAGGTGCA AGAAGACATC AAACATGCGA TGCATCTTCA 
    GACCATGCTT AACAATGATC GTGTGAAGAT GTCAGAGGTA CAGCTCCGCC 
    TCTCGAAAGA GCAGCTTGAA TTGGCCAGAA TAAAGCAGGA AGAAGCAAGG 
    GAGAAGAAGG AAACTACACT TTACAAGAAG TACACGGAGC TGTTGCTGGC 
    AGACACTTCA AGGTTCGATG AGTTTCAGAA GGCAGAGTAT GAGAAAGCAC 
    TGAGGCATAT AGGAGGAATG CTATTCAGCA AGGATGGCAA TTAGTGCCCT 
    TGCTTCAATT TGTCTTAAAG CGTTACTGTG CAAATGTCAT CTCAAGCACT 
    AGCTAGTCAT AGATCCTTCT ATTCTACCTG TTGAATGAAG GGACTAGTCA 
    TAGATCACTT GCAAGTTTAG CCTAGACTTA CTGACATCCA GTTTGTGGAA 
    CTTGACTAAT TGAATCCTGT AAGTGATGGA TCAATATGTA GTCAGCTTTA 
    GTTGGCTCGT CTAAGTTCTT AGGAATGTTC ATTCAGCTGG CAGAAATGTC 
    CATTTTGCTA ACCTGATCTA CACTAGCAAG AATGCTTGAA CAGTGGTGTC 
    TATGCAACAT CGACGGCAAG AATGCTTGAA CAGCTATAGT GTAGATAAGG 
    CAACCTCTTT GTTGGTTGTC GTGAGAACAT TCTGGGGTGT CAGCTGTGAT 
    CTCACATTGC ATCCCATGCC AAAAACAAAA TGTTCCTATT CGGACAAGAG 
    AAAACTAATT ATGTTGCATC C

    Gene models with high sequence identity

    1. AT5G41220.1 [+] show detail - glutathione S-transferase THETA 3
      E-value: 0.0000001; Score: 56.20

     

    InterPro Scan Digest

    See the detailed result >

    AT5G41220.1

    Model type
    Protein coding
    Short Description
    glutathione S-transferase THETA 3
    Curator Summary
    Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).
    Computational Description
    glutathione S-transferase THETA 3 (GSTT3); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336), MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 2 (TAIR:AT5G41240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR