K31601

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31601

Determination of introduced cDNA(s)

J013081D14 - Rice Full-length cDNAs - Original: J013081D14

full reading [+] show sequence

GTGAAATCGA TGCACTCGGT GATTAATGAC CTCAATTCTA GGATCTCCTT 
TGTCGTGGCC GAGAACGCAA CACTGCGGCA GCAGCTTAGT GGCGGCAGTG 
TGAATTGCCC ACCACCTGGG GTGTATCCGC CGGCGCCAAT TCCCGGCATG 
CATTTCCCAT GGATGCCTGG GTATGCAATG AGACCCCCTG GTTCCCATGT 
ACCTCTTGTG CCAATCCCCC GGTTGAAGCC GCAACAGCCA GTGCCTTCAT 
CCAAAGTAGT GAAGAAACCA GAGAGCAAGA AGACTGTGGA GAACAAGAGT 
AAGAGCAAGA CCAAGACCAA GAAGGTGGCT AGTGTTAGCC TTCTTGGTTT 
GCTGCTTATT ATGCTTGTCT TTGGTGCTTT CATTCCAGGG TTTAGTCATA 
ACTTTGGAAT GTGTGGGCAG AGTGATAATG CTATGTTTAG GAATTTTGGT 
CAGTCTCATG CTAGGGTGTT GAGTGTCAGT AGCCAGGATA AAAGTAGTTT 
GAACAATAGC GACATGATTG GTGTTGATGT TGGAAAGATG ACGGGGAATA 
CTGATGGGCC AGGGAAGAAA CATCAGCCTG CACACAACTC AAGTGAGATC 
CTCCCTGCTT TGTTGTATGT GCCGAGGAAT GGAAAGCATG TTAAGATCAA 
CGGCAACCTG ATTATTCATT CTGTGCTTGC AAGCGAGAAA GCAGTGGCAC 
ATAAGGCCTC AAAAGATGAT AGTGATCAGT CAGCTAGAGA TCACAAAGAG 
ACTAGTGTTG CCATAGCTCG TTATCTTTCG CTGCCTGGAA AGGATGTGAA 
TCGACAGGAG ACATCCTCGG CAGATGGACC ATTGCCACAA TGGTTTCGTG 
AAGGAATGGA AGGACCTATA TTAAATTCTG GAATGTGCAG TGAGGTATTT 
CAGTTTGACA TTTCGACGGC TTCTAGCAAT CCTGGTGGCA TTATACCTGC 
ATCTCCTGTT GTGAACTCGT CAAGTGTCAA TGCTACCGAG AAAATCCCAG 
CACATTCTGC TGCTTATCTG GCAAGCTGAA AAACAGAAGA GTCATGTACA 
ATGAAGCGAT TCCACTCACC GATCCAAGGG AGGCTGGTAA TGGGGATGGC 
GATCCGAGAG TATCTCCGAA ACCCCTGTCC AAGATATTTG TTGTTGTTCT 
TGTTGACGGT GTGAGATATG TCACTTACTC CTGCACGCTT CCTTTCAAGA 
GCTCCAGCCC ACATCTTGTG AACTAAGCGG CTGGGTTGTT CGCCAAAAAC 
TGACAGATGA ATAGATTTAT ACAATGATCT GATGCTGTTT CCTAACCAAG 
GACTAAACTT CCTATGCACT CAGGCTGAGG TAATTCAAGT TTGTCGAAGG 
TTCGGAGTGA TGAGTGCGAG TTTAGTTAAT GTATGCAGTT TTTGCAGTGC 
TGTGATAATC GGGTTCGTTT GCTGTACCTC TAGCTGTAAC GGTGATGTAA 
TCATGTAATA CTGTTTGATC GTTGAGATAT AAGTGCAACT AGTAATATGG 
GTAGTCGAGA ACACGTGCAG AATATACATG CCTTTTTTTA CCTT

Gene models with high sequence identity

AT2G40950.1 [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
E-value: 2e-33; Score: 140.00

InterPro Scan Digest

See the detailed result >

AT2G40950.1

Model type: Protein coding
Short Description: Basic-leucine zipper (bZIP) transcription factor family protein
Curator Summary: bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.
Computational Description: BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink).
Link: InterPro Scan - TAIR